Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00561 ATGCCTTCAGTTTACATGGGAGATAGGGCGGATAATTCTACCTTGAGCATGGGAACTAATTCTAAAGAAACCAGTGTTGTCACCGGGAAAAATACATACAAAAACCTTCTGGTTGCATCACGACCTAAAGGCTTTACACAGAGAAATTATGAACAACTTGTGTCATTAACCCATGGTGACTTTGGAAGCAGTGTTGTGGGTCGTGCCACTTTTTTTTTACTCAAAGTTGCTGCATTAGAGACCGTGAGGAGGTTCTCCAAGAGTAAATGCCCGTGTGTATGGCGAGGCCTGCAGGGTCTACAAATCCTTGTCTATCCACCTTTCAAATGGATTCAGAGGTGGGCACCCTTCAGGGGTTTGGTGAAGAGCATGCAGGTACTATCAAGACCACTTTTAGTTCTATCGATTGCGACAGTCTTCACTGATCAACCACAATGTAGTGATGGAACCTCAGATTGTGTTGCTGATTCTCCTGATTCTGAAGTATCTGCCGAACTATCTCCTGCACAGCCTATCTTGAATACAAGTCATTCTGAGATAGATCCTGAAGTTCTAGAATATGAAAACTGGTTGACTCTACTTAATCAAGAGCTGGAAAATCAAGGGATTAGTTTGCCAGATAGAATCAATGATGATGAGCTCCGCAGATTTTACACAGCTTCTAATAATGACTTTTCATGCTTCCTTACCTCAATCAAGAAGACAATACGGTGGCGGGAGAGTTACAGATTTCTTTCAGGAGAAGAGCTGGAAATGTGGTCAAATATGGTGTTCTGGCATGGATTTGATGTTTTGCACAGACCTTGCCTCATTGTACGGCTTGGGATAGCTTGTCGCTCTTTGGCGTCTGAAGATAGACTTCAGTTTGCTCAGGCAGTTATATCACAGGTAGAATACGGAGTCTTGCACTTGGTAGATGCAGACAACCCTCAAATTGCAGTATTGGTGGACTGTGAAGGGTTATCTCCATTGAGAATTCCCATGAAAATTTTGAGATCTTGTTCCTCCCTTCTGCAAGATTACTTTCCTAATCGACTTGGTTGTTTGTTTGTCATCCGACTGCCAGCAATTGTTCGCGTTATTGCTCAGACTTTTATTCAGGTTTTAAAGCCAGCTACTAAGAAGAAGTTGAAATTAGAGGGAGAGATATATCGGAAAGCACTTTTTGACAATTTTCCGATACCACCATCGTATCTTGGTGGAGGATGCTCTTGCATGAGATGTTCTAAAATTGGCAACTGGGATGTGCTGCAACCTCATTCAACTGGGACAAGCAGAATTGATAGGGAGCAGGATGTCAGTGACAATGGGGGTTTGCCATCACTACATCCATCTAATGAATTAGATGACCGCCAAGTCAACAATTCTGACCAGCTCTTGAGAAAGGCTGTCATAAGTTTTCTCGTATTTTGGGTTTTCATAGCTCTTGGTGCTGGAATTTACGATCCTGGTAGTCGCCATTTAAGCCCCATAACCTAA 1479 0.4273 MPSVYMGDRADNSTLSMGTNSKETSVVTGKNTYKNLLVASRPKGFTQRNYEQLVSLTHGDFGSSVVGRATFFLLKVAALETVRRFSKSKCPCVWRGLQGLQILVYPPFKWIQRWAPFRGLVKSMQVLSRPLLVLSIATVFTDQPQCSDGTSDCVADSPDSEVSAELSPAQPILNTSHSEIDPEVLEYENWLTLLNQELENQGISLPDRINDDELRRFYTASNNDFSCFLTSIKKTIRWRESYRFLSGEELEMWSNMVFWHGFDVLHRPCLIVRLGIACRSLASEDRLQFAQAVISQVEYGVLHLVDADNPQIAVLVDCEGLSPLRIPMKILRSCSSLLQDYFPNRLGCLFVIRLPAIVRVIAQTFIQVLKPATKKKLKLEGEIYRKALFDNFPIPPSYLGGGCSCMRCSKIGNWDVLQPHSTGTSRIDREQDVSDNGGLPSLHPSNELDDRQVNNSDQLLRKAVISFLVFWVFIALGAGIYDPGSRHLSPIT* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00561 492 MobiDBLite consensus disorder prediction 1 21 - -
Lapu11g00561 492 PANTHER SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN 17 483 - -
Lapu11g00561 492 CDD SEC14 248 401 IPR001251 -
Lapu11g00561 492 SUPERFAMILY CRAL/TRIO domain 252 406 IPR036865 -
Lapu11g00561 492 Pfam CRAL/TRIO domain 255 391 IPR001251 -
Lapu11g00561 492 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 259 407 IPR001251 -
Lapu11g00561 492 SMART sec14_4 251 404 IPR001251 -
Lapu11g00561 492 MobiDBLite consensus disorder prediction 423 450 - -
Lapu11g00561 492 Gene3D - 185 435 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00561 Lapu-Chr11 8933395 8939945 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00561 - - gmx:100814843 868.226