Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00549 ATGTCGGTGAGTTCGAGTTCCAGGGGAAGGATAACGACGGAGCTCCAAGTCCCGAAGAAATGGACTGACAGAGAAACCAGTCCAGAGAGAACCAAGGTTTGGGCCGAGCCCAAGCCCAAAACGCCCAGAAAAGTCTCCGTCGTTTACTACCTCTCCCGAAACGGCCAACTCGAACACCCTCATTTCATGGAGGTTTCTCTCTCTTCACCTCAAGGACTTTACCTTAAAGACGTAATCAACCGCTTGAACGTTCTCCGAGGGAAAGCCATGCCCACTATGTACTCTTGGTCCTCCAAACGGAGCTACAAAAACGGCTTCGTTTGGCACGATTTGTCTGAGAACGATTTCATCTACCCGACGCAGGGGCAGGACTACATTCTCAAAGGATCGGAGATTGTTGAGCACAGTGTCGCCGGCGGTGCCAGGGTTAACAAATCGGACGAGGAGTCCGATTCCCCTGTGGTGATCACGAGGCGGCGGAACCAGTCCTGGAGTTCTATCGATTTGAACGAGTACCGTGTTTATAAAGCCGAATCGTTCGGTGACTCGGCTGGGAGAATCGGCGCCGACGCGGCCACTCAGACGGAGGAGAAGCGGAGGCGGAGGAGGGCGGCGAGGGAGGAAGAGGTGCAAGAGATTCAAGAGAAGAACGATGAAATTGACGCGGGAATGGAAGGGGAGAGGGTCCCGCATGTGACTTGTGATAATAACAATAATCACACTACGGAGTTGAGTAGGGATGAGATTTCGCCTCCACCGTCAGATTCGAGTCCTGAGACGCTAGAGACTCTGATGAAAGCAGATGGACGACTCGGATTGCGCTCTTCGGAATCGGAGAAGGAGAATCTGATGGTGGAGAGCTGTCCTAGTGGGAGGATGAGAGCCTCGTCGGTTTTGTTGCAGTTGTTATCGTGCGGCGCAGTGTCTTTTAAGGAGTGTGGGGTTAACACGGTGAAAGATCAAGGGTTGTCATTGGTTGGGCACTACAAGTCCAGGATCCCCCGTGGAGCAGGGAATCATGTGGGAAAGGATACAGGGATATCGATGGAAATTCCGGATTTGAGCAGGTTAAGGTTGGAAGATAAAGAATATTTCAGTGGGAGCTTGATCGAAACAAAGAAAGCGGAAACCCCTGCTTTGAAGAGGTCCTCTTCTTACAATGCAGATAGCGGTTCCCGGTTACAAATAGTGGAGCGTGAAGGAGAAGTGGTGCGGGCAAAGTGCATACCAAGGAAATCTAAGACATTACCAACAAAGAAAGAAGAGGGTGCTTCCATGCATATTGCTAGCGGTGGCCAACATGGTAGCAAAAGATTTGACGCACAACAATAA 1332 0.5105 MSVSSSSRGRITTELQVPKKWTDRETSPERTKVWAEPKPKTPRKVSVVYYLSRNGQLEHPHFMEVSLSSPQGLYLKDVINRLNVLRGKAMPTMYSWSSKRSYKNGFVWHDLSENDFIYPTQGQDYILKGSEIVEHSVAGGARVNKSDEESDSPVVITRRRNQSWSSIDLNEYRVYKAESFGDSAGRIGADAATQTEEKRRRRRAAREEEVQEIQEKNDEIDAGMEGERVPHVTCDNNNNHTTELSRDEISPPPSDSSPETLETLMKADGRLGLRSSESEKENLMVESCPSGRMRASSVLLQLLSCGAVSFKECGVNTVKDQGLSLVGHYKSRIPRGAGNHVGKDTGISMEIPDLSRLRLEDKEYFSGSLIETKKAETPALKRSSSYNADSGSRLQIVEREGEVVRAKCIPRKSKTLPTKKEEGASMHIASGGQHGSKRFDAQQ* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00549 443 MobiDBLite consensus disorder prediction 192 228 - -
Lapu11g00549 443 MobiDBLite consensus disorder prediction 17 37 - -
Lapu11g00549 443 MobiDBLite consensus disorder prediction 1 37 - -
Lapu11g00549 443 Pfam Protein SOSEKI, plant 45 390 IPR010369 -
Lapu11g00549 443 MobiDBLite consensus disorder prediction 411 443 - -
Lapu11g00549 443 MobiDBLite consensus disorder prediction 186 260 - -
Lapu11g00549 443 PANTHER UPSTREAM OF FLC PROTEIN (DUF966) 24 431 IPR010369 -
Lapu11g00549 443 MobiDBLite consensus disorder prediction 232 260 - -
Lapu11g00549 443 PIRSF UCP031043 12 431 IPR021182 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00549 Lapu-Chr11 8853135 8857148 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00549 - - gmx:100779732 746.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00549 11 8853135 8857148 Lapu11g00549 11 8853135 8857148 ECH