Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00547 ATGTCTCGTATCTCCACATTGTATCTTCTCGCTTACAACTCCTTTCAGACCATTGGATGGACGCTTTCCTTGGTTAAGATTTTGTACAATCTTCTCGCCACTGCCTCCATCAACGGAACCTATGCTTCCGCCGGCAACTTAATTTGTTTTCTGCAATGTGCTGCATTCTTGGAAGTTATACACGGAGCCATTGGTATTGTGCCCAGCGGAGTTTTGCTTCCTCTTATGCAATGGGGAGGAAGGACCCACTTTGTGCTTGCTATTGTTCGGAAACTTGAGGAGCTCCAGGAAATACCTTCAGTTTTTATCACTCTTCTTGCATGGAGCATGGGTGAGGTCATTAGGTATTCACATTATGCTTTCGGTTGTTTGGGAAATTGTCCTTCTTGGATGACCTATCTCAGGTACACCGCGTTTATTGTGCTGTATCCTTTGGGAGTGGGTCCTGGTGAAATATGGACTATGTACCAGGCGCTTCCAATTATAAAGAAGAAGAATCTCTATGCAGATTCCTTTTCAGGCCTCCCATTTAGTTATTATGATTTCCTTAAGGTTGTACTTGTAGTTTATCCATTCTTATGGTTCAAACTTTAC 594 0.4293 MSRISTLYLLAYNSFQTIGWTLSLVKILYNLLATASINGTYASAGNLICFLQCAAFLEVIHGAIGIVPSGVLLPLMQWGGRTHFVLAIVRKLEELQEIPSVFITLLAWSMGEVIRYSHYAFGCLGNCPSWMTYLRYTAFIVLYPLGVGPGEIWTMYQALPIIKKKNLYADSFSGLPFSYYDFLKVVLVVYPFLWFKLY 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00547 198 PANTHER VERY-LONG-CHAIN (3R)-3-HYDROXYACYL-COA DEHYDRATASE 5 198 IPR007482 -
Lapu11g00547 198 Pfam Protein tyrosine phosphatase-like protein, PTPLA 52 198 IPR007482 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00547 Lapu-Chr11 8833816 8837621 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00547 K10703 - gmx:100527607 383.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00547 11 8833816 8837621 Lapu11g00547 11 8833816 8837621 ECH