Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00529 ATGGAGTCACCAACTGTGCAGCCGCAAGCTGCACCAGCAAGGACGCCAAGGAAAAAAATGACAAAACAATTGACAGGTAAAAGGGATGATACCCCTTTGCATTCTGCAGCAAGAGCAGGGAATCTGAGCGTTCTGAAAGACACAGTTAGTGGCACTGAAGGGGGTGAACTCCGTGCGTTGTTGACAAAGCAGAACCATGCTGGAGAAACGGTGCTTTATGTTGCCGCTGAATATGGTTATGTGGATATGGTTAGGGAGATGATTCAATATTATGATCTTGCTGGTGCTGGAATTAAGGCAAGGAGTGGTTTTGATGCACTCCACATTGCTGCCAAACAAGGCGATTTAGATATCGTGAAGATCCTAATGGAGGCTCATTCTGAATTGTCAATGACAGTGGATCCATCCAACACCACAGCCCTGCACACTGCTGCATTACAAGGGCACACTGAGATAGTGAAATTTCTATTGGAAGCAGGTAGTAGTCTGGCAACCATTGCTAGAAGTAATGGGAAAACGGCTTTGCATTCTGCAGCAAGAAATGGACATTTAGAGGTTGTGAAAGCACTTCTGGAGAAGGAGCCTGCAGTTGCAACGCGGACTGATAAGAAGGGACAGACAGCACTTCACATGGCAGTGAAGGGACAGAATCTTGAGGTGGTGGCGGAGTTGATAAAAGCTGATCCCTCAACAATAAACATGGTTGATAACAAGGGTAACACGGCATTGCATATAACAACCAGGAAGGGCAGGGTTCAGATTGTTAAGTTGCTTCTTTCACAGACAGAAACAGATTCCTTAGCAGTTAATAGGTCTGGCGAAACTGCACTAGACACTGCGGAAAAAACTGGGAACACTGAAGTTAAAGAAATTCTGCTGGAACGTGGTGTTCAAAGCGCCAAAGCCTTAAAGGCTCAGCCAGCAACAACTACAGCCCGTGAGTTGAAACAAACTGTGAGTGACATAAAACATGAAGTCCACTACCAGTTGGAACACACCCGCCAAACTAGAAGAGGTGTTCAAGGCATAGCCAAACGTATCAATAAAATGCATGCTGAAGGACTCAACAATGCAATAAACTCCACCACTGTTGTTGCAGTCCTCATTGCTACAGTTGCCTTTGCAGCTATCTTCACAGTCCCTGGCCAATTTGCTGATGATCCAAAAGACATTCCTCCAGGTTCAGGGGTGACCATTGGTGAAGCAAACATAGCCCCGCAAGCTGCATTTCTCATTTTCTTTGTTTTTGATTCCATTGCCCTCTTCATTTCTCTGGCTGTGGTGGTGGTGCAAACCTCGGTTGTGATCATAGAAAGCAAGGCAAAGAAGCAGATGATGGCCATCATTAACAAGCTGATGTGGTTGGCTTGTGTGCTGATTTCTGTGGCCTTCTTGGCACTGACATTTGTAGTTGTGGGGAAGGATCAGAAGTGGCTAGCAATTGGAGTCACTATCATAGGGACAACTATAATGGCCACAACTTTGGGCACCATGTGTTACTGGGTTATTAGGCATCGCATAGAGGCCTCAAATTTAAGGAGCATTCGGAAATCTTCAATGGGAAGCAGATCAAGGTCTTTCTCAGTATCAGTTATGTCAGATTCTGAGCTTCTAAACAATGAGCGTAAGATACTTTATGCGATATAA 1647 0.4517 MESPTVQPQAAPARTPRKKMTKQLTGKRDDTPLHSAARAGNLSVLKDTVSGTEGGELRALLTKQNHAGETVLYVAAEYGYVDMVREMIQYYDLAGAGIKARSGFDALHIAAKQGDLDIVKILMEAHSELSMTVDPSNTTALHTAALQGHTEIVKFLLEAGSSLATIARSNGKTALHSAARNGHLEVVKALLEKEPAVATRTDKKGQTALHMAVKGQNLEVVAELIKADPSTINMVDNKGNTALHITTRKGRVQIVKLLLSQTETDSLAVNRSGETALDTAEKTGNTEVKEILLERGVQSAKALKAQPATTTARELKQTVSDIKHEVHYQLEHTRQTRRGVQGIAKRINKMHAEGLNNAINSTTVVAVLIATVAFAAIFTVPGQFADDPKDIPPGSGVTIGEANIAPQAAFLIFFVFDSIALFISLAVVVVQTSVVIIESKAKKQMMAIINKLMWLACVLISVAFLALTFVVVGKDQKWLAIGVTIIGTTIMATTLGTMCYWVIRHRIEASNLRSIRKSSMGSRSRSFSVSVMSDSELLNNERKILYAI* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00529 548 ProSiteProfiles Ankyrin repeat profile. 238 260 IPR002110 GO:0005515
Lapu11g00529 548 ProSiteProfiles Ankyrin repeat profile. 170 202 IPR002110 GO:0005515
Lapu11g00529 548 ProSiteProfiles Ankyrin repeat region circular profile. 102 130 - -
Lapu11g00529 548 ProSiteProfiles Ankyrin repeat region circular profile. 170 193 - -
Lapu11g00529 548 SMART ANK_2a 67 96 IPR002110 GO:0005515
Lapu11g00529 548 SMART ANK_2a 136 165 IPR002110 GO:0005515
Lapu11g00529 548 SMART ANK_2a 28 59 IPR002110 GO:0005515
Lapu11g00529 548 SMART ANK_2a 238 269 IPR002110 GO:0005515
Lapu11g00529 548 SMART ANK_2a 102 131 IPR002110 GO:0005515
Lapu11g00529 548 SMART ANK_2a 272 302 IPR002110 GO:0005515
Lapu11g00529 548 SMART ANK_2a 204 234 IPR002110 GO:0005515
Lapu11g00529 548 SMART ANK_2a 170 199 IPR002110 GO:0005515
Lapu11g00529 548 ProSiteProfiles Ankyrin repeat profile. 204 237 IPR002110 GO:0005515
Lapu11g00529 548 MobiDBLite consensus disorder prediction 1 34 - -
Lapu11g00529 548 ProSiteProfiles Ankyrin repeat region circular profile. 136 163 - -
Lapu11g00529 548 ProSiteProfiles Ankyrin repeat profile. 272 298 IPR002110 GO:0005515
Lapu11g00529 548 Pfam Domain of unknown function 353 470 IPR026961 -
Lapu11g00529 548 ProSiteProfiles Ankyrin repeat region circular profile. 272 298 - -
Lapu11g00529 548 Gene3D - 130 296 IPR036770 -
Lapu11g00529 548 Gene3D - 17 129 IPR036770 -
Lapu11g00529 548 ProSiteProfiles Ankyrin repeat region circular profile. 204 226 - -
Lapu11g00529 548 ProSiteProfiles Ankyrin repeat region circular profile. 238 260 - -
Lapu11g00529 548 ProSiteProfiles Ankyrin repeat profile. 102 134 IPR002110 GO:0005515
Lapu11g00529 548 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 16 528 - -
Lapu11g00529 548 SUPERFAMILY Ankyrin repeat 32 296 IPR036770 -
Lapu11g00529 548 Pfam Ankyrin repeats (3 copies) 170 229 IPR002110 GO:0005515
Lapu11g00529 548 Pfam Ankyrin repeats (3 copies) 89 163 IPR002110 GO:0005515
Lapu11g00529 548 Pfam Ankyrin repeats (3 copies) 233 297 IPR002110 GO:0005515
Lapu11g00529 548 ProSiteProfiles Ankyrin repeat profile. 136 168 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00529 Lapu-Chr11 8688306 8692587 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00529 11 548 Miscellaneous Gene Families AT1G07710 71.747 0.0 730
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00529 - - gmx:100808971 930.243