Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00528 ATGGACGACGAACTGCTCGAGCTGCAGCGACAATTCGAGTTCGCGCAGCAAGCCAAGTCGAGCATTCGATTATCAGAGCGAAACGTCGTCGAATTGGTCCAAAAACTGCAGCACCTCCAAATCATCGATTTCGAACTTCTCCACACTGTATCTGGCAAAGAGTACATCACTCTGGATCAACTGAGGAATGAGATGGTGGCGGAGGTGAAGAGATTAGGGCGCGTGTCGTTGATCGATCTCGCTGACGCTACTGGAGTTGACTTGTACTACGTGGAGAAGCAGGCGCAGAGCGTTGTCTCGGCACACCGAGAACTCATGTTGACTCAAGGAGAAATCATGTCTGGGTCTTATTGGGACTCAATCGCGGAAGAGATTAATGAGAGGCTTCAGGAGTGTAGTCAGATTGCGCTGACGGAAATCGCGGCGCAATTGAACGTAGGTTTGGACTTGGTTGCCTCCGTGTTGGAGCCACGCCTTGGAACAATTGTGAAAGGAAGGCTTGAAGGTGGCCAGCTGTATACTCCTGCCTATGTGGCTCGTGTTGGTGCCATGGTTCGAGGAGCTTCGCGGGGCATAACTGTTCCGACGAATTTGAGTGCAGTATGGAGTTCGTTGCAGCAGTTGCTGCAAGAAATTGACGGAACCAGCGGTTTGGCTGTTGAAGGTTCTTTCTTCCAGTCATTGTTTAACGGACTGGTGAAGGAAGGCGAGGTTCTAGGGTCACTTCGTGCAGGAGTACATTGGACACCAGCTGTATTTGCTGTTGCTCAAAGGGAGTTTGTGGAGTCATTCTTTTCTCAGAATTCTTTTATCACCTATGAGGCACTACACAAACTTGGAATTCCCCAGCCCATTCAATTTTTGCAGTCCAGATACCCTGAAGGCAAACCTCTAGTTACAACATTTGTTCATCCATCTATGATTGAGATGCTAGATGCTGCTACTGAGGATGCTATTGACCGTGGTAGCTGGAGTGATTCTCTTTCCTTATTACCTTCATCTTTTACACCTCAAGATGCTTCTAAAATGTTGTCCTTTTGTCAGTCTGTGCAAAATGCTCTTAAGTCTAACAAAGCACACATTTTTGGGGATTTTTATGTGTTGAGCAGCAGCTTTATAAAGGACATCTGTGATCGTGTTGTGAAAGAGTTGGAGACATTAGGTGTTTCAAGGTCTGCTGGCACTACAATGCCTGGTGATGTTCAAGTACCGAATGAAGCTAAAGTAGGGCATGAGTCAAGCAGGTTGAATGAGTCCAATGAGATGGCAAATGATGGTGGTGCCAACAGGCAAGCTGATAAAGGATCAAAGAAGAAAAAGGGGAAAGCCTCAGGGAATCCAGTAGTAAATCTATCTGAAAGTGGTGCAGATAACCGGGAACAGACTTTGACAAAATCTAAGAGAGGCAACAAAAGAGGTAAGGATACATCTGCACAAACGTCAGATTCAAAGACAGGTTCTAGGAAAGAATTGCTTAAAATGAAAGAGGAAAATCTCAGTCCCTCAGAAGAATGGATCATGCAGAAAATTACGGCATTGGTTTCTGATTTTGAAGAACAAGGTATAGAGGATCCTGAAATAATTCTTAGGCCTTTGGCTAACCAAATAAAGCCTACAATAATCAGTTCTTGGATGGAGAAAAAGAAGGCGCTGCATACAAACAATGCTGATAGAATGAAACGTTTGCTTGATAATTTGCAAAAGAAACTTGATGAGTCTTTCTTAAACATGCAGCTGTATGAAAAAGCCTTAGAATTGTTTGAAGATGATCAATCAACTTCTGTTGTTTTGCATAGGCATTTACTAAGAACAGTAGCAGCTCCTATGGTGGATTTGCTTCTTTGTATCCTGGATGAGCACAACAAATTAAAAAATGGACTTGATGTGCAGGACGCCTCGAATACTGAATTTGTTTCACTTAGTCCTGCAGACAGAACTGCAATTTCAAAGAGTTTTCCAGAAGCTCTTTCAAACAAGGCTCTTGCTGTTGTTGAATCATTGGAAGGAAAGAGTGTGGAGACATTCATGGCTGCTTTTAGAATGGTTACAGAAGAGAGCGGTCTGCCTTTGAAAAAGCTTGACAAGAAACTAGAAAGAACACTCTTACATTCATATCGTAAGGAATTGACATCTCAAGTTTCTGCCGAGACTGACCCTGTATCACTTCTGGCAAAAGTTGTGTCTTTACTTTATATCCAGGTTTACCACAAAGCTCTTCAAGCTCCTGGAAGGGCCATTTCCGTCGCTATTTCCCATTTAAAGGATAAGCTAGACGAGTCAGCATGCAAGATTTTAACTGATTATCAAACTGCCACAGTGACTCTTTTGACACTATTAGCAGCTTCACCCGGTGATGATGAGGATTGTGCATCTGATAGGATTTTGAGTAAAAGGGAGCTTCTAGAGAGCCAAATGCTGGACCTCAAAAACTTGGTTTTGAGCACGACCCAATCTTCATAA 2460 0.4358 MDDELLELQRQFEFAQQAKSSIRLSERNVVELVQKLQHLQIIDFELLHTVSGKEYITLDQLRNEMVAEVKRLGRVSLIDLADATGVDLYYVEKQAQSVVSAHRELMLTQGEIMSGSYWDSIAEEINERLQECSQIALTEIAAQLNVGLDLVASVLEPRLGTIVKGRLEGGQLYTPAYVARVGAMVRGASRGITVPTNLSAVWSSLQQLLQEIDGTSGLAVEGSFFQSLFNGLVKEGEVLGSLRAGVHWTPAVFAVAQREFVESFFSQNSFITYEALHKLGIPQPIQFLQSRYPEGKPLVTTFVHPSMIEMLDAATEDAIDRGSWSDSLSLLPSSFTPQDASKMLSFCQSVQNALKSNKAHIFGDFYVLSSSFIKDICDRVVKELETLGVSRSAGTTMPGDVQVPNEAKVGHESSRLNESNEMANDGGANRQADKGSKKKKGKASGNPVVNLSESGADNREQTLTKSKRGNKRGKDTSAQTSDSKTGSRKELLKMKEENLSPSEEWIMQKITALVSDFEEQGIEDPEIILRPLANQIKPTIISSWMEKKKALHTNNADRMKRLLDNLQKKLDESFLNMQLYEKALELFEDDQSTSVVLHRHLLRTVAAPMVDLLLCILDEHNKLKNGLDVQDASNTEFVSLSPADRTAISKSFPEALSNKALAVVESLEGKSVETFMAAFRMVTEESGLPLKKLDKKLERTLLHSYRKELTSQVSAETDPVSLLAKVVSLLYIQVYHKALQAPGRAISVAISHLKDKLDESACKILTDYQTATVTLLTLLAASPGDDEDCASDRILSKRELLESQMLDLKNLVLSTTQSS* 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00528 819 Pfam E3 UFM1-protein ligase 1 4 288 IPR018611 GO:0061666|GO:0071569
Lapu11g00528 819 MobiDBLite consensus disorder prediction 460 478 - -
Lapu11g00528 819 MobiDBLite consensus disorder prediction 391 490 - -
Lapu11g00528 819 PANTHER E3 UFM1-PROTEIN LIGASE 1 2 818 IPR018611 GO:0061666|GO:0071569
Lapu11g00528 819 Coils Coil 549 583 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00528 1 785 EF-hand Containing Proteins AT3G46220 62.817 0.0 952
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00528 K22755 - gmx:100808087 1401.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00528 11 8677427 8685926 Lapu11g00528 11 8677427 8685926 ECH