Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00503 ATGAGAACAAGCAACCATTTGATCGGTGTGCTAAACTTCCTAACGTTTCTGTTGTCGATTCCGATCCTAGGTGGTGGGATATGGCTGAGCAGCAGAGCGAACAACACGGACTGTATGAAGTTCCTGCAGTGGCCGTTGATAATAATCGGCGTGAGCATCATGGTGGTGTCGCTGGCGGGTTTCGCCGGCGCCTGTTACCGGAACACGTTCCTGATGCGGCTGTACCTGGTGGTGATGTTGGCGGTGATTGCGGTGCTGATCGGGTTCATCATATTCGCGTACGTGGTGACGGACAAAGGGTCGGGTCGGAGGGTGATGAACCGGGCGTATTTGGAGTACAACTTGGAGGACTATTCGGGGTGGTTGGAGGAGCGTGTGGCGAGTGATAGCTACTGGGGGAAGATTGCCTCTTGCATTAGGGATTCTAAAGTGTGTGCGAAGATGGGAAGAACCATTAATGGAGTTCCTGAAACTCCTGATATGTTCTACCTCAGACACCTCACACCTATTCAGTCTGGTTGCTGCAAGCCCCCCACAGAATGTGGGTATGTGTATCAGAATGAGACTGTGTGGAACCTAGGATCAGGATTGATGGGAGGCAATGCAGACTGCACTAGGTGGAGCAATGACCAAGAACTGCTTTGCTATGCCTGTGATTCCTGCAAGGCTGGTGTGCTGGCAAGTCTGAAGAAGAGTTGGAGGAAGGTCTCAGTGATCAACATTGTTGTTATGATCCTCCTTGTGATTGTTTACATAATTGCTTATGCAGCATATAGGAACAACAAGAGGATGGATAACGATGAACCCTATGGTGAAGCCAGGATGACAAAGGCACACCCCAGTGCCTTTCATCTTTAG 858 0.5012 MRTSNHLIGVLNFLTFLLSIPILGGGIWLSSRANNTDCMKFLQWPLIIIGVSIMVVSLAGFAGACYRNTFLMRLYLVVMLAVIAVLIGFIIFAYVVTDKGSGRRVMNRAYLEYNLEDYSGWLEERVASDSYWGKIASCIRDSKVCAKMGRTINGVPETPDMFYLRHLTPIQSGCCKPPTECGYVYQNETVWNLGSGLMGGNADCTRWSNDQELLCYACDSCKAGVLASLKKSWRKVSVINIVVMILLVIVYIIAYAAYRNNKRMDNDEPYGEARMTKAHPSAFHL* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00503 285 Pfam Tetraspanin family 6 254 IPR018499 GO:0016020
Lapu11g00503 285 PRINTS Transmembrane four family signature 66 94 - -
Lapu11g00503 285 PRINTS Transmembrane four family signature 6 29 - -
Lapu11g00503 285 PRINTS Transmembrane four family signature 39 65 - -
Lapu11g00503 285 PANTHER TETRASPANIN-8-RELATED 1 264 IPR044991 GO:0009734|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00503 Lapu-Chr11 8300262 8305000 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00503 1 277 Miscellaneous Gene Families AT5G60220 72.202 1.79e-130 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00503 - - gmx:100798336 514.998