Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00498 ATGGCTGAAACATCATCTTCCTCGGAGGACCAGAATCAACGTCATATTCCCATCGAAATTATCAGCGACGACGAAATGGCTCTCATTGAAGCTGCTTTGGCTTTCGCTTCCACTCGTTCTTGCTCCGCAATTCGTTCTTCTTCTTCTTCAAAATCACCCCTTCACAATAATGCGTTATCCATCACCTCTAAAAGAAGGTTATCGAGTGGCAGTGATATTGAGGACTTACCCACCCACAAGAAAAAACAGAATCTTTCCGATTCCTTTCTTCGCCGCTTCAGGAGCAAACGGGGTTTGTCCGTCACGGATCTTACTTCCACGGAATGGTGCCCGAAGCAAATGGAGTTTTCTCTCCTTCTTGGAGGGCGAAAGGTTAATCAAGCAATGAGAGCAGGCATTGCTCGCCATGCAAAGCTTGAAGAAGAGGTTTTAAAACGGGTGGAAGTGAAGATCAAATGTCAAGAAGATTACTGGGCCTTGAAGTTTCTTAATTTTATAAATGGTGTACATCAATTATTATTTGAAGGATTGACTCGTGAACTGCCAGTAATAGGCTTTGCAGAAGATATATGCATGGTGGGAGTGATTGATGAGATTCGGATGCCATTAAAAGAAAATGATCGTAATCCAATACTCATTGACACAAAGACACGCACTCGAGATTCGCTTCCTTCCGAACCGCAACGAAGAAATGGAAGGCTTCAATTGATGTGCTACAAGTATTTGTGGGACAATTTGGTTGCTGATAATTTTCCTTCTAAAACTTTTTTCACTTATTTTGGCTTAAACCCTCAACATAATCTATGTGATGATCTAAAAGTGACAAGTGCTGACTCTGGATTTTCTGCTTCGACCCTGGATGATGTGGTGAGATATTACATTAATACATGTAGGATGCTGGTCCCTGCTCATGATCAGCTCTTGTTGAGATATGAGTATCAGAAAGATCATTCACTGCTGGGTGAAGATAAATTCGCATACGATCATGGATGGCTAAAGAGTCAAATTCGTTCATGTATTGAGTTTTGGCTTGGAGAACAAGAAGCCACTTACCCTCCTGAAGAGGAACGCTGGAAATGTCATTACTGTCAATTTGCTGCCTTCTGTCCGGCAGACAATGATAGTAAAGGAACGATGGCACCTAAAAGCAATGATTTAAACATCAAAGAAGGCTAG 1176 0.4184 MAETSSSSEDQNQRHIPIEIISDDEMALIEAALAFASTRSCSAIRSSSSSKSPLHNNALSITSKRRLSSGSDIEDLPTHKKKQNLSDSFLRRFRSKRGLSVTDLTSTEWCPKQMEFSLLLGGRKVNQAMRAGIARHAKLEEEVLKRVEVKIKCQEDYWALKFLNFINGVHQLLFEGLTRELPVIGFAEDICMVGVIDEIRMPLKENDRNPILIDTKTRTRDSLPSEPQRRNGRLQLMCYKYLWDNLVADNFPSKTFFTYFGLNPQHNLCDDLKVTSADSGFSASTLDDVVRYYINTCRMLVPAHDQLLLRYEYQKDHSLLGEDKFAYDHGWLKSQIRSCIEFWLGEQEATYPPEEERWKCHYCQFAAFCPADNDSKGTMAPKSNDLNIKEG* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00498 391 Gene3D - 78 371 IPR011604 -
Lapu11g00498 391 PANTHER EXONUCLEASE V 8 377 IPR019190 GO:0045145
Lapu11g00498 391 Pfam Exonuclease V - a 5' deoxyribonuclease 298 369 IPR019190 GO:0045145
Lapu11g00498 391 Pfam Exonuclease V - a 5' deoxyribonuclease 89 205 IPR019190 GO:0045145
Lapu11g00498 391 Pfam Exonuclease V - a 5' deoxyribonuclease 206 272 IPR019190 GO:0045145
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00498 Lapu-Chr11 8209874 8214324 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00498 K17815 - gmx:100792136 627.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00498 11 8209874 8214324 Lapu11g00498 11 8209874 8214324 ECH