Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00487 ATGGTGAAAAAGCAGTCTGTCTTGCCCTTCTCAGGACCACTGCTAGTTTCAATTTTGTCTTTCACCACCACTTTAGCCCAGTTATCACCAGCTGCTTCCCCTCTAAAACCACCCCTTCCAACCCATACACCACCAGCCGCAGCCCCTAAACCATTGGTTCCATCGTTGCCACAGTCACCAAGTTATGCCAGCCCTGACACTGCAGCCGTTGACATTGTTGGAATCCTGAGGCAGGCCAAGTCATTCAGCATCCTTATCCGCCTCATGAAAACCACCCAATTGATCAACCAACTCAATGCACAGCTCCTCACTACTAAATCAGGTGGCATCACCATTCTTGCAGGCTTCCTCAACTCTCTTTCTGATGGACAAAAGCTCGAGCTCTTACAGTTCCACGTTCTTTCTGACTATGTGTCTAGCTCCAACTTTGATACTCTAACCAACCCTGTGAGAACCCTTGCTGGGGCTAAACCTGGAAAGGTGGAACTGAATGTGATAAGTTACGGTGGGAGTGTGAATATCTCAACGGGTGAGGTTAATACCACCATCACAGGCATTGTATATACGGATAAGCATCTCCCTATTTACAAGGTGGGGAAGGTGCTTCTTCCCATGGACTTCTTTGCTGTTGCTAAGGTACCTGCAAAGGCACCCTCATTGGCTCCAGAGCCATCTGCAAAGGCTCCTAAAGCGGATAAGGAGAAGTCACTTTCTCCGGATTCCTCAGATTCATCTGAGATTAATTCCACAAACGAGAACTCTGGCAGTACGAAAATCAATATGGTTGGAAAGTGGGTGTTCCTTGTTCTTGGACTAGTTCTTGTGACTGCATTGTCTTTGTAA 843 0.4721 MVKKQSVLPFSGPLLVSILSFTTTLAQLSPAASPLKPPLPTHTPPAAAPKPLVPSLPQSPSYASPDTAAVDIVGILRQAKSFSILIRLMKTTQLINQLNAQLLTTKSGGITILAGFLNSLSDGQKLELLQFHVLSDYVSSSNFDTLTNPVRTLAGAKPGKVELNVISYGGSVNISTGEVNTTITGIVYTDKHLPIYKVGKVLLPMDFFAVAKVPAKAPSLAPEPSAKAPKADKEKSLSPDSSDSSEINSTNENSGSTKINMVGKWVFLVLGLVLVTALSL* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00487 280 Gene3D FAS1 domain 56 204 IPR036378 -
Lapu11g00487 280 MobiDBLite consensus disorder prediction 219 253 - -
Lapu11g00487 280 SUPERFAMILY FAS1 domain 69 205 IPR036378 -
Lapu11g00487 280 ProSiteProfiles FAS1/BIgH3 domain profile. 69 202 IPR000782 -
Lapu11g00487 280 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 14 269 IPR045003 -
Lapu11g00487 280 MobiDBLite consensus disorder prediction 33 58 - -
Lapu11g00487 280 MobiDBLite consensus disorder prediction 32 60 - -
Lapu11g00487 280 Pfam Fasciclin domain 81 204 IPR000782 -
Lapu11g00487 280 FunFam Fasciclin-like arabinogalactan protein 11 55 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00487 Lapu-Chr11 8078627 8079803 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00487 - - gmx:100790242 401.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00487 11 8078627 8079803 Lapu11g00487 11 8078627 8079803 ECH