Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00486 GCATCAAACACAAATCTCAAGAACCTTCAAAGTCATCATATCTCCAGGCTTGACTTAAGCAGCTGGAAGATGAAACAAGCAACCTTTATCTCCTTGTCACTCTTCCTACTTCTTTCCTCCCCTGGCTTGGCCATTTCACCTGCACCTGCAGCAGCCCCAAAATCCCCTGCAGCAAAAACTCCCCATACCCCAAAGGCTGCAGCACCATCACCAAAACCATTAGTCCCCTCCTTACCTCAGTCTCCAGACTCCCCTGACTCTGTCCCCGATGACATCACCAGAATCCTCAAAAAGGCCAAAATGTTCTCAGTCCTAATCCGCCTCCTCAAAACCACAGAAATCATGAACAACATCAACTCACAGCTCATAACAGCCAAGAGTGGGGGCATAACCATCCTTGCACCAGATGATTCTGCCTTTTCCAACCTCAAAGCAGGCTTCCTCAACTCCCTAAATGAAGGCCAGAAAATCGAACTTGTGCAGTTCCACATATTGCCAGAGTTCGTGTCCAGCTCAAACTTCGATTCTCTGAGCAACCCCGTGCAGACAGTGGCTGGTAAAGACCCTGCAAGGCTTCCACTGAATGTGAATGCATTAGGTAACAGTGTCAACATTTCAACTGGGGTCGTGAATGCCACCATTCTTGGGGTAGTATATTCGGATAATAAACTTGGGATTTATCACGTGGACAAGGTGCTTCTTCCTCTAGATTTCTTTGTAACCAATAAGGCTCCAGCTTTGGCTCCAACAACCCTTGCAAAGCCTCCCAAAGCTGCAAAGGATGAGGACGATAAAGACGAAACAAATCAAGATCAGAATAAATCGGGGGCAAGGGTGAATTTGGTTCGCATTGGCGGAACAAATTTAATGTTACTCGGCATAACTTTTATCGCAATAGCGACCATGTGGAGTTGA 915 0.4667 ASNTNLKNLQSHHISRLDLSSWKMKQATFISLSLFLLLSSPGLAISPAPAAAPKSPAAKTPHTPKAAAPSPKPLVPSLPQSPDSPDSVPDDITRILKKAKMFSVLIRLLKTTEIMNNINSQLITAKSGGITILAPDDSAFSNLKAGFLNSLNEGQKIELVQFHILPEFVSSSNFDSLSNPVQTVAGKDPARLPLNVNALGNSVNISTGVVNATILGVVYSDNKLGIYHVDKVLLPLDFFVTNKAPALAPTTLAKPPKAAKDEDDKDETNQDQNKSGARVNLVRIGGTNLMLLGITFIAIATMWS* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00486 304 MobiDBLite consensus disorder prediction 251 275 - -
Lapu11g00486 304 MobiDBLite consensus disorder prediction 256 272 - -
Lapu11g00486 304 Gene3D FAS1 domain 78 235 IPR036378 -
Lapu11g00486 304 SUPERFAMILY FAS1 domain 71 236 IPR036378 -
Lapu11g00486 304 SMART fasc_3 131 236 IPR000782 -
Lapu11g00486 304 MobiDBLite consensus disorder prediction 66 83 - -
Lapu11g00486 304 MobiDBLite consensus disorder prediction 48 90 - -
Lapu11g00486 304 Pfam Fasciclin domain 101 235 IPR000782 -
Lapu11g00486 304 FunFam Fasciclin-like arabinogalactan protein 11 77 235 - -
Lapu11g00486 304 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 29 280 IPR045003 -
Lapu11g00486 304 ProSiteProfiles FAS1/BIgH3 domain profile. 89 233 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00486 Lapu-Chr11 8075906 8077013 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00486 - - gmx:100795316 368.237