Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00485 ATGATGAAAAACCAATATGTCTCGTCCTTCTCACTAGCACTGTTACTTTCACTTTTGTATTCCACCACCACTTTAGCCCAAATATCACCAGCTTCATCCCCTCTCCAACCTCCCCAACCAACCTCTACACCACCAGCTGCAGCCCCTAAGCCATTGGTTCCCTCATTGCCACAATCACCAAGTGATGCCACTCCTGACACTGCAGCCGTTGACATTGTTGGAATCCTGAGGCAAGCCAAGTCATTCAACATCCTTATCCGCCTTATGAAAACCACCCAATTGATCAACCAACTCAATGCACAGCTCCTCACTACCAAATCAGGTGGCGTAACCATTCTTGCGCCTGAGGACAGTGCTTTCTCTGAACTCAAAGCAGGCTTCCTCAACTCTCTTTCTGATGGACAAAAGCTCGAGCTCTTACAGTTCCATGTTCTGTCAGACTATGTTTCTAGCTCCAACTTTGATACACTGACCAACCCTGTGAGAACACTTGCAGGGGCTAAACCTGGAAAGGTGGAACTGAATGTGATAAGTTACGGTGGGAGTGTGAACATCTCAACGGGTGAGGTTAATACCACCATCACTGGCATTGTATATACTGATAAGCATCTTGCTATTTATAAGGTAGGCAAGGTGCTTCTTCCTATGGACTTCTTTGTTGTTGCTAAAGCACCTGCAAAGGCACCCTCTTTGGCACCAGAATCTTCGGCAAAGGCGCCTAAAGCGGATAAGGAGAAGTCACTGTCTCCAGATTCCTCGGAATCATCTGAGATTCATGGCACAAACGATACCTCTGGAACTGTGAAAATCAATCATGGAAAGTGGTTGTCACTTGCCCTTGGACCAATTCTCCTTATTGCATTGTCATCATGA 873 0.4628 MMKNQYVSSFSLALLLSLLYSTTTLAQISPASSPLQPPQPTSTPPAAAPKPLVPSLPQSPSDATPDTAAVDIVGILRQAKSFNILIRLMKTTQLINQLNAQLLTTKSGGVTILAPEDSAFSELKAGFLNSLSDGQKLELLQFHVLSDYVSSSNFDTLTNPVRTLAGAKPGKVELNVISYGGSVNISTGEVNTTITGIVYTDKHLAIYKVGKVLLPMDFFVVAKAPAKAPSLAPESSAKAPKADKEKSLSPDSSESSEIHGTNDTSGTVKINHGKWLSLALGPILLIALSS* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00485 290 MobiDBLite consensus disorder prediction 231 265 - -
Lapu11g00485 290 Gene3D FAS1 domain 54 215 IPR036378 -
Lapu11g00485 290 Pfam Fasciclin domain 81 215 IPR000782 -
Lapu11g00485 290 MobiDBLite consensus disorder prediction 238 252 - -
Lapu11g00485 290 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 9 265 IPR045003 -
Lapu11g00485 290 MobiDBLite consensus disorder prediction 33 58 - -
Lapu11g00485 290 MobiDBLite consensus disorder prediction 29 65 - -
Lapu11g00485 290 SUPERFAMILY FAS1 domain 67 216 IPR036378 -
Lapu11g00485 290 FunFam Fasciclin-like arabinogalactan protein 11 55 215 - -
Lapu11g00485 290 ProSiteProfiles FAS1/BIgH3 domain profile. 69 213 IPR000782 -
Lapu11g00485 290 SMART fasc_3 111 216 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00485 Lapu-Chr11 8069968 8070840 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00485 - - gmx:100790242 405.216