Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00483 ATGATGAAAGAGCAATGTGTCTTGTCCTTCTCACTAGCACTGCTACTTTCATTTTTGTATTCCACAACCACTTTAGCCCAATTATCACCAGTTGCCGCCCCTCTAAAACCACCCCAACCTACCCCTACACCACCAGCTGCAGCCCCTAAACCTTTGGTTCCCTCATTGCCACAGTCACCAAGTGATTCCACCCCAGACACTGCAGCAGTTGACATTGTTGGAATCCTGAGGCAGGCCAAGTCATTCAACATCCTTATCCGCCTCATGAAAACCACCCAATTGATCAACCAACTCAATGCACAACTCCTCACTACTAAATCAGGTGGCATCACCATTCTTGCACCTGATGACAGTGCCTTCTCCGAACTCAAAGCAGGCTTCCTCAACTCTCTTTCTGATGGCCAAAAGCTCGAGCTCTTACAGTTCCACGTTCTTTCTGACTATGTGTCTAGCTCCAACTTTGATACTCTAACCAACCCTGTGAGAACCCTTGCTGGGGCTAAACCTGGAAAGGTGGAACTGAATGTGATAAGTTACGGAGGGAGTGTGAACATCTCAACCGGTGAGGTTAACACCACCATCACTGGCATTGTTTACACAGATAAACATCTTGCTATTTACAAGGTGGGGAAGGTGCTTCTTCCTATGGACTTCTTTGCTGTTGCTAAGGCACCTGCAAAGGCACCCTCATTGGCGCCAGAACCATCAGCTAAGGCTCCTAAAGCGGAGAAGGAGAAGTCACTTTCTCCAGATTCCTCAGATTCATCTGAGATTAATTCCACAAAAGAGAACTCTGGAACTATGAAAATCCACATGCATGGAAAGTGGGTGTCCCTTGTTCTTGGAATAGTTCTTGTGACTGCATTGTCCTGGTAG 876 0.4692 MMKEQCVLSFSLALLLSFLYSTTTLAQLSPVAAPLKPPQPTPTPPAAAPKPLVPSLPQSPSDSTPDTAAVDIVGILRQAKSFNILIRLMKTTQLINQLNAQLLTTKSGGITILAPDDSAFSELKAGFLNSLSDGQKLELLQFHVLSDYVSSSNFDTLTNPVRTLAGAKPGKVELNVISYGGSVNISTGEVNTTITGIVYTDKHLAIYKVGKVLLPMDFFAVAKAPAKAPSLAPEPSAKAPKAEKEKSLSPDSSDSSEINSTKENSGTMKIHMHGKWVSLVLGIVLVTALSW* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00483 291 FunFam Fasciclin-like arabinogalactan protein 11 55 215 - -
Lapu11g00483 291 MobiDBLite consensus disorder prediction 35 65 - -
Lapu11g00483 291 ProSiteProfiles FAS1/BIgH3 domain profile. 69 213 IPR000782 -
Lapu11g00483 291 MobiDBLite consensus disorder prediction 35 58 - -
Lapu11g00483 291 SUPERFAMILY FAS1 domain 64 216 IPR036378 -
Lapu11g00483 291 SMART fasc_3 111 216 IPR000782 -
Lapu11g00483 291 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 8 279 IPR045003 -
Lapu11g00483 291 MobiDBLite consensus disorder prediction 229 265 - -
Lapu11g00483 291 Pfam Fasciclin domain 81 215 IPR000782 -
Lapu11g00483 291 Gene3D FAS1 domain 54 215 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00483 Lapu-Chr11 8056887 8057762 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00483 - - gmx:100792674 400.208