Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00482 ATGAAACAACCAACCCTTTTCTCCTTATCACTCTTCCTTCTCCTTTCCACCGCCTTGGCCATTTCACCTGCACCTGCTGCAGCCCCTAAAGCCCCAGCAAAAAATCCCCCTACCCCAAAGGCAACAGCACCATCACCAAAACCATTAGTCCCCTCCTTACCTCAGTCTCCGGACTCCCCTGACTCTGTCCCCGATGACATCACCAGAATCCTCAAAAAGGCCAAAATGTTCTCAGTCCTAATCCGCCTCCTCAAAACCACAGAAATCATGAACAACATCAACTCACAGCTCATAACAGCTAAGAGTGGCGGCATAACTATCCTTGCACCAGATGATTCTGCCTTTTCCAACCTCAAAGCAGGCTTCCTCAACTCCCTCAACGAAGGCCAGAAAATCGAACTTGTGCAGTTCCACATCTTGCCTGAGTTTGTGTCCAGCTCAAACTTTGATTCTCTTAGCAACCCCGTACAGACAGTGGCTGGTAAAGACCCTGCCAGGCTTCCACTGAACGTGAATGCATTAGGTAACAGTGTCAACATTTCAACTGGGGTCGTCAATGCCACCATTCTTGGGGTAGTATACTCGGATACCAAACTTGGGATTTATCACGTGGACAAGGTACTCCTTCCTCTAGATTTCTTTGTAACCAATAAGGCCCCGGCTTTGGCTCCAACAACTCTTGACAAGGCTCCCAAAGCTGCTAAGGAAAACTCATCCGATGACGATCAAGATGAAACAAATGATAATAAGAATAAATCCGGGGCAGTGAATTTGGCTAGCATTGGTGGATCAAAGTTGATATCACTTGGGATAAGCAAGAATCCTTCAATGATTCACGATTCAGCTATTGCTGTTAAACCATAA 864 0.4653 MKQPTLFSLSLFLLLSTALAISPAPAAAPKAPAKNPPTPKATAPSPKPLVPSLPQSPDSPDSVPDDITRILKKAKMFSVLIRLLKTTEIMNNINSQLITAKSGGITILAPDDSAFSNLKAGFLNSLNEGQKIELVQFHILPEFVSSSNFDSLSNPVQTVAGKDPARLPLNVNALGNSVNISTGVVNATILGVVYSDTKLGIYHVDKVLLPLDFFVTNKAPALAPTTLDKAPKAAKENSSDDDQDETNDNKNKSGAVNLASIGGSKLISLGISKNPSMIHDSAIAVKP* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00482 287 SMART fasc_3 106 211 IPR000782 -
Lapu11g00482 287 MobiDBLite consensus disorder prediction 26 64 - -
Lapu11g00482 287 MobiDBLite consensus disorder prediction 226 256 - -
Lapu11g00482 287 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 6 258 IPR045003 -
Lapu11g00482 287 MobiDBLite consensus disorder prediction 233 249 - -
Lapu11g00482 287 MobiDBLite consensus disorder prediction 29 58 - -
Lapu11g00482 287 SUPERFAMILY FAS1 domain 43 211 IPR036378 -
Lapu11g00482 287 Gene3D FAS1 domain 53 210 IPR036378 -
Lapu11g00482 287 ProSiteProfiles FAS1/BIgH3 domain profile. 64 208 IPR000782 -
Lapu11g00482 287 FunFam Fasciclin-like arabinogalactan protein 11 52 210 - -
Lapu11g00482 287 Pfam Fasciclin domain 76 210 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00482 Lapu-Chr11 8054210 8055387 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00482 - - gmx:106794109 413.305