Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00481 ATGATGATGCAACATTCTCTCTTCTTATGTGCCTCACTTGTACTTGTGATAGTCACCACATCAGCTCAACACTCACCCGCAGCATCTCCCTCTATCTCAACAGTACCACAATCACCATTGGCACCTCCATCGGGAATGAATACTGTTCCATTGGTACCAGCGTCCCCTAACGGTGCCCCAACTGCCGCCACCCCAAAAGCTCCTACCATTGACATTGCTCAAATACTGAGTAAGGCCAAAAGATTTTCTGTTCTGATTCGGCTTCTGAAGACAACCCAGTTGATCAACCAACTCAACTCTCAACTCCTCACATCAGATTCCGGGGGATTGACCATTTTTTCCCCACCTGACACTGCCTTTTCAAAGCTAAAAGGAGGGTTCCTGAACTCACTCAACGACAGGCAAAAGGTGGAACTCCTACAATTCCACACTCTTTCTTCCTTCGTCTCAATCTCCAACTTCGACACTCTCACCAACCCCGTTCAGACCCAAGCCGGTGATGACCCCCAAAGGCTGCAACTTAACATCACCACTTCCGGTGGCAGCCACGTGAGCATGAGCACCGGTGCCGTTAATGCCACCATTACAGGCACAGTATATACAGACAACAAGCTTGCTATTTATGAGGTAGACAAGGTGCTTCTTCCACTTGACGAGGTCCTCCCTAAGCCTAAGGCTCCGGCACCAACGTCACATGCAGACAGAAGAAGTGATAGTAACAAAAATATGGATGATGACAGTGGTATTCAGGTGGAGGCTTCTGGTGGTTGCATGAATTTCAACAGCGTACATGTAAAGTGGATCTCTTTTGTCGTTGGGGTTACTTTGATGGCCATGATATGA 843 0.4792 MMMQHSLFLCASLVLVIVTTSAQHSPAASPSISTVPQSPLAPPSGMNTVPLVPASPNGAPTAATPKAPTIDIAQILSKAKRFSVLIRLLKTTQLINQLNSQLLTSDSGGLTIFSPPDTAFSKLKGGFLNSLNDRQKVELLQFHTLSSFVSISNFDTLTNPVQTQAGDDPQRLQLNITTSGGSHVSMSTGAVNATITGTVYTDNKLAIYEVDKVLLPLDEVLPKPKAPAPTSHADRRSDSNKNMDDDSGIQVEASGGCMNFNSVHVKWISFVVGVTLMAMI* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00481 280 MobiDBLite consensus disorder prediction 26 44 - -
Lapu11g00481 280 MobiDBLite consensus disorder prediction 221 250 - -
Lapu11g00481 280 ProSiteProfiles FAS1/BIgH3 domain profile. 69 214 IPR000782 -
Lapu11g00481 280 Gene3D FAS1 domain 69 216 IPR036378 -
Lapu11g00481 280 MobiDBLite consensus disorder prediction 26 64 - -
Lapu11g00481 280 FunFam Fasciclin-like arabinogalactan protein 11 54 216 - -
Lapu11g00481 280 SUPERFAMILY FAS1 domain 61 217 IPR036378 -
Lapu11g00481 280 MobiDBLite consensus disorder prediction 229 245 - -
Lapu11g00481 280 SMART fasc_3 111 217 IPR000782 -
Lapu11g00481 280 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 4 259 IPR045003 -
Lapu11g00481 280 Pfam Fasciclin domain 81 216 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00481 Lapu-Chr11 8051623 8052768 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00481 - - gmx:100819829 432.565