Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00442 ATGGGTTTTGGTCGAACTTCGACCTCGAGAAGTGGAGATTACTTGGAAGGGATGCTTAATAATGACAATGTTGGAGGAAGAAACAAACTGAAGGCTCAGAAAGGTGCCTCCACAAAGTTTGTTGCAGCACTCACTTGCCTTCAGTTTTTCTTTGCAGTCTATGCAACATTCCTATTGTATTACATGGGGCCTTCCATTGACTTAAGAACCAAGCCAGAGTTCACATGGGCTACCAAAATTGCCCAACAATGGAAACAACTTATGATCACACCCCACGTTATTGGCCACTACCAAGAATCTGCTTCCTCTCTCGTCATGGAGGATGTTCTTCCCACAACTCCATCACAAGTGTGTGAGAATGAGAAGATAGACTTCCTGCAAAAGAAGTCCAATGATGTCCAAATGATCAAGTTAAAGAGAGAGCTCTACGATGAGGTGTTGAACTTCCAAAGCAAAACCTTTGGCACCGAGACTCTCCAGGAGCTAATGGCAATGAAATCCAAGTGGGACTTGAAGGGTCCAAACAGCCCAAAAATCACCGTGTTGCTAAACCATTTCAAGAGAAAGACACTTTGTGCTCAGCTTGATTCTTTGCTCCAACAGACCCTTCCTTTCCATCATGCTTGGGTTCTTTCATTTGGGAGCCCCAATGAGGCCTCGTTGAGGAGAATTGTGGACACCTATAATGACTCAAGAATCAGCTTCATAAGCTCAAGCTATGATTTCAAGTACTACGGAAGGTTCCAAATGGCTCTTCAGACTGAAGCTGATCTTGTGTATGTTATTGATGATGACATGATTCCGGGGAGGAAGATGTTGCAGATTTTGGCGCACGTGGCTGGGACAGAAAAATACAAGAATTCTGTTTTGGGGAGTATTGGAAGGATTTTGCCTTTTAGACAGAAGGATTTCACGTTTCCAAGTTACAGAAAATTTCGGTCTAAGGAGGCAGGGTTGTATTTACCAGATCCTGCTTATGATATCACAGTCGATAAAATTGTGCAGGTGGATTTTCTATCTAGTTCATGGTTTCTTTCTGCTGATCTTGTCAAGACACTATTCATTGAGACACCTTTTACCTTCTCAACTGGTGAAGATCTGCACCTCAGCTATCAGCTTCAGAAGTACAAAAATGCTGGCTCCTTTGTTCTTCCAGTAGATCCTAAGGACAAGGAAACTTGGGGAGATAGTGAACACAGGCTTGCATATGTGTCTGAAACTACAGTGATTTTCAAGGACATAGTTCAAGTCAGGGATGATCAATGGTGGAAAGCACTTTCCACTGGTTATGTGACTCAGTGGGCTGCAATGTACCCTCAAAAAGTTGATGTACTTTTCTATGCTCACTCAGTTGATGAAGTGAAAGTGCTTGCACCACTTCTTGAAAAATTCAGGTCCACAGTTGGCAAGAAGGCCTACATTGTTGTCTCTGGAGGCAGTTTCTGCCCTTGTGGAGATGCTGCAACAGCTCTCAAATGGCCTACAATTGTCTGCAAAGAACGTCGGTTCAAGATTTTTGATTTGGCCATTGGATCACTTTCTGGGGTGTCAGACTCAGAGGCACCAGTGATACATGCAGTGTACACCAGCATGAAGGGTTTGATCAAAATTCACAACCCCAGTGTAGTGATCACTGTTGCTGACATTGACCCTCATGTGAGAAAAGCTCTTAAGATGGCATCAGAAACCAACTCCAATGCTACCACATTGGTTCTTTTACCCAGGGCATCAGTGTCTCAAGTTCTCTGGATGGCTGATCTGCGTTCAACAGCATTACCAAATTGGAATCGGATGAGGATTTCTGTGAACATCATCACCCAAAATAGAGCCAATTCACTAACAAGGCTTCTCAAATCTCTAAGCAATGCCTACTATCTTGGAGATGAAATTCCCATTACCTTCAACATGGATAGCAAGGTAGATGAGGAAACTATAAGACTAGTAGGTTCATTTGAGTGGCCTCATGGGCCCAAAACCCTGAGAAGGAGAATCATCCAAGGTGGTCTAATTCGGGCTGTGAGTGAAAGTTGGTATCCATCATCAGATGATGACTTTGGTCTCCTACTAGAAGATGACATTGAAGTTTCCCCTTACTACTACCTATGGATCAAATATGCACTCATGGCTTACCACTATGACCCTCAAGTCTCTCTCCCTGAGCTCTCCTCCATCTCCCTCTACACTCCAAAGCTTGTTGAAGTTGTCAAAGAGAGACCCAAATGGAATGCAACAGAATTCTTCAAACACATCCACCCCAACACACCTTACCTTCACCAACTACCTTGCAGCTGGGGAGCAGTGTTCTTCCCCAAGCATTGGAGAGAGTTCTATGTGTACATGAATATGAGGTTCACTGAGAATGCCAAATCTAACCCAGTCCAAATTCCAAAATCTAGAACAAATGGATGGCAAGCTTCATGGAAGAAGTTCCTCATAGATATGATGTACCTTAGAGGGTATGTTAGTCTCTACCCAAATTTCCCTCAACAAGCAAGCTTTTCAACCAATCATATGGAGCCAGGGGCACATATTAGTGCAAAAGACAATGTGGTTAAGCATAACAAACAGGACTTTGAGGTGCCACTATTGAAAGAAGACTTCAGAAACTTGTTGCCAGCAATGAAGATGCCTCCAGCATCAAAGCTTCCATCTCTAAACCTCTTCAATCAACCAGTTTCCCTAAAGGGTCTCAAAGCTGCTGGAGCTAAGTTGGGACAGGATGTGCTAAGATGCAACAATGCCACTGAGGTTGTGGCTGTTGATCAAGACACTGGTCTACCTCACACCTGCTCCAAATTCTGA 2802 0.4361 MGFGRTSTSRSGDYLEGMLNNDNVGGRNKLKAQKGASTKFVAALTCLQFFFAVYATFLLYYMGPSIDLRTKPEFTWATKIAQQWKQLMITPHVIGHYQESASSLVMEDVLPTTPSQVCENEKIDFLQKKSNDVQMIKLKRELYDEVLNFQSKTFGTETLQELMAMKSKWDLKGPNSPKITVLLNHFKRKTLCAQLDSLLQQTLPFHHAWVLSFGSPNEASLRRIVDTYNDSRISFISSSYDFKYYGRFQMALQTEADLVYVIDDDMIPGRKMLQILAHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDITVDKIVQVDFLSSSWFLSADLVKTLFIETPFTFSTGEDLHLSYQLQKYKNAGSFVLPVDPKDKETWGDSEHRLAYVSETTVIFKDIVQVRDDQWWKALSTGYVTQWAAMYPQKVDVLFYAHSVDEVKVLAPLLEKFRSTVGKKAYIVVSGGSFCPCGDAATALKWPTIVCKERRFKIFDLAIGSLSGVSDSEAPVIHAVYTSMKGLIKIHNPSVVITVADIDPHVRKALKMASETNSNATTLVLLPRASVSQVLWMADLRSTALPNWNRMRISVNIITQNRANSLTRLLKSLSNAYYLGDEIPITFNMDSKVDEETIRLVGSFEWPHGPKTLRRRIIQGGLIRAVSESWYPSSDDDFGLLLEDDIEVSPYYYLWIKYALMAYHYDPQVSLPELSSISLYTPKLVEVVKERPKWNATEFFKHIHPNTPYLHQLPCSWGAVFFPKHWREFYVYMNMRFTENAKSNPVQIPKSRTNGWQASWKKFLIDMMYLRGYVSLYPNFPQQASFSTNHMEPGAHISAKDNVVKHNKQDFEVPLLKEDFRNLLPAMKMPPASKLPSLNLFNQPVSLKGLKAAGAKLGQDVLRCNNATEVVAVDQDTGLPHTCSKF* 934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00442 933 CDD Glyco_tranf_GTA_type 189 280 - -
Lapu11g00442 933 SUPERFAMILY Nucleotide-diphospho-sugar transferases 177 377 IPR029044 -
Lapu11g00442 933 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 599 848 IPR029044 -
Lapu11g00442 933 PANTHER OSJNBA0004B13.7 PROTEIN 281 924 - -
Lapu11g00442 933 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 161 386 IPR029044 -
Lapu11g00442 933 SUPERFAMILY Nucleotide-diphospho-sugar transferases 597 783 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00442 Lapu-Chr11 7738315 7742235 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00442 - - gsj:114374559 1787.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00442 11 7738315 7742235 Lapu11g00442 11 7738315 7742235 ECH