Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00428 ATGAACAATTCTCACTCCGAAAATCATGATGAAGCAACTGTGGTGGGATTTGAAGTTCCTAAATCACCTGACTCCAGTTACAACAATGTCTACCCTGGAAATGAAGATGAGGCTAGGGATCCGCCTATGGTGCCTTCACATTTGCAACACCCTTTGCTCAATTATCCTGCTAATAGAGACACTGCAGGAACTGTTCCATTGCCTCAGAATGTGATTCTAAATCATCTTTACATCGAGAATAGAGAGTCCCCAAGATCTGTGGTGGCGTTGGGATTCACTCATCGATTCCGCTCTAAATATGTTACAGTCGTGCTTTACAAACCAGTCCAAAGAAGGGGAAATACAGGTATTTAA 354 0.4266 MNNSHSENHDEATVVGFEVPKSPDSSYNNVYPGNEDEARDPPMVPSHLQHPLLNYPANRDTAGTVPLPQNVILNHLYIENRESPRSVVALGFTHRFRSKYVTVVLYKPVQRRGNTGI* 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00428 117 MobiDBLite consensus disorder prediction 1 61 - -
Lapu11g00428 117 Pfam 5'-AMP-activated protein kinase beta subunit, interaction domain 38 108 IPR006828 GO:0005515
Lapu11g00428 117 SUPERFAMILY AMPKBI-like 12 109 IPR037256 -
Lapu11g00428 117 SMART AMPKBI_2 20 109 IPR006828 GO:0005515
Lapu11g00428 117 Gene3D - 12 109 - -
Lapu11g00428 117 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1 3 111 IPR043554 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00428 Lapu-Chr11 7435008 7438031 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00428 - - gmx:102661902 237.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00428 11 7435008 7438031 Lapu11g00428 11 7435008 7438031 ECH