Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00425 ATGGGTGGACTCAAAGTAAGAAGCAGCAGCAGAAAATTAAGGGTTGTGGGTGGTATTTTGAAGTTGAAGGGTGTGTTGGAAAAGCTTCAAAAGAGTGTCTTATTGAGGAGACATAAAACAAGTTCCTATGGTGGTGGATATTATGAAGAATTAGGAGATGACAGAAGGTGTGTGGCAGAAGATGTGAAAGAAGGACATTTTGTTGTGATTGCAAAGGATATTGGAGAGGAGGGAAAGAGATTGGTGGTTCCATTGAGCTGTTTAAAGAACCCAACATTCTTGAGGCTATTGGAGGAAGCAGCAGAAGAGTATGGGTTTGATCAACATGGAGCACTAACCATTCCTTGCAGACCTAGTGAACTTGAGATGCTATTGACTCAGCAATGGGAAGAAAGAAGGAGAGTCTGA 408 0.4191 MGGLKVRSSSRKLRVVGGILKLKGVLEKLQKSVLLRRHKTSSYGGGYYEELGDDRRCVAEDVKEGHFVVIAKDIGEEGKRLVVPLSCLKNPTFLRLLEEAAEEYGFDQHGALTIPCRPSELEMLLTQQWEERRRV* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00425 135 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 42 124 IPR003676 GO:0009733
Lapu11g00425 135 Pfam Auxin responsive protein 43 125 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00425 Lapu-Chr11 7404377 7404784 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00425 8 125 Calmodulin-binding Proteins AT3G43120 30.714 8.66e-12 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00425 - K14488 vum:124826917 194.126
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00425 11 7404377 7404784 Lapu11g00425 11 7404377 7404784 ECH
Lapu5g00489 5 4349421 4349831 Lapu11g00425 11 7404377 7404784 PCT