Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00423 ATGGGCGCGAAAAAGAAGACAGGTAGCGGAAACGGCAACAAGGAGAACCAGGATGGCACCACCACCGTCGTTTTAAAGCTCGACTTCCACTGCGACGGTTGCGCTTCCAAAATCACTCGACACCTTCGTGCTTTCCAAGGTGTGGAGACGGTGAAGGCGGAGGGCGACGCCGGGAAGGTAACAGTGACCGGGAAAGTGGACCCCATGAAGTTGAGGGACAATCTGGCCGAGAAGATGAAGAAGAAGGTGGAAGTCATCTCTCCGCAGCCCAAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGGAAAATAAGGACGCCAAAACCAACAACAAAACCCACGACAAGAAAAACAAGGACAAAGAGGTGGTGACTACCGGGGTTCTGAAGATGGCACTGCATTGCCAAGGATGCTTGGACAGGATTGGCAAGACTGTGCTGAAAACCAAAGGAGTGCAAGAAATGGCTATAGACAAGGAAAAGGAAACGGTGACTGTGAAGGGGACAATGGATGTGAAGGCTCTGGCCGAGAATCTAACGGAGAAGCTGAAAAGGAAGGTTGAGGTGGTCCCTCCCAAGAAAGAGAAGGAGGGTGACAAGGAAGGTGAGAAGGACAAGGAAGGATCAGGGAAGAAGAAGAACAAGGGTGGTGGTGGTGGAGCAGCAGCAGGAGGAGGTAATACTGAAGAGGGAATAGAGAAAATAGATTACAGTAGAATGGAGTATTTGCCACAGCCTTCTTTTGGCTTTGGTTATGGTTATGGACACGGCAATGTTGGTGGCTATGGCTATGTGCCAGTGTACCCGGAGCAGATGCACTTTCACTTGCACGCGCCACCACCACAAATTTTTAGTGACGAGAATCCGAATGCTTGTTCTGTGATGTGA 891 0.5039 MGAKKKTGSGNGNKENQDGTTTVVLKLDFHCDGCASKITRHLRAFQGVETVKAEGDAGKVTVTGKVDPMKLRDNLAEKMKKKVEVISPQPKKEKEKEKEKEKEENKDAKTNNKTHDKKNKDKEVVTTGVLKMALHCQGCLDRIGKTVLKTKGVQEMAIDKEKETVTVKGTMDVKALAENLTEKLKRKVEVVPPKKEKEGDKEGEKDKEGSGKKKNKGGGGGAAAGGGNTEEGIEKIDYSRMEYLPQPSFGFGYGYGHGNVGGYGYVPVYPEQMHFHLHAPPPQIFSDENPNACSVM* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00423 296 CDD HMA 134 189 IPR006121 GO:0046872
Lapu11g00423 296 Pfam Heavy-metal-associated domain 29 82 IPR006121 GO:0046872
Lapu11g00423 296 Pfam Heavy-metal-associated domain 133 188 IPR006121 GO:0046872
Lapu11g00423 296 MobiDBLite consensus disorder prediction 187 214 - -
Lapu11g00423 296 ProSiteProfiles Heavy-metal-associated domain profile. 125 196 IPR006121 GO:0046872
Lapu11g00423 296 Coils Coil 91 118 - -
Lapu11g00423 296 SUPERFAMILY HMA, heavy metal-associated domain 21 85 IPR036163 GO:0046872
Lapu11g00423 296 SUPERFAMILY HMA, heavy metal-associated domain 126 188 IPR036163 GO:0046872
Lapu11g00423 296 Gene3D - 121 198 - -
Lapu11g00423 296 Gene3D - 20 94 - -
Lapu11g00423 296 MobiDBLite consensus disorder prediction 187 230 - -
Lapu11g00423 296 CDD HMA 30 84 IPR006121 GO:0046872
Lapu11g00423 296 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6 4 296 IPR044594 GO:0046872
Lapu11g00423 296 MobiDBLite consensus disorder prediction 77 121 - -
Lapu11g00423 296 ProSiteProfiles Heavy-metal-associated domain profile. 20 91 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00423 Lapu-Chr11 7385236 7386974 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00423 - - gsj:114377132 340.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00423 11 7385236 7386974 Lapu11g00423 11 7385236 7386974 ECH