Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00400 ATGGCGTCACCATTATCTTCTCTCTCCTCATCCTCTTCTTCACTCTTTCCCCACACCTTCTCCGGAAGCTCGAAGGTTCCAATTCACTTCCCCAACAAAACTGCGCACTTTTTGGTCTTGGCGCAAAAGAAGGCAAAGAAAACTCGAAAGATTATTCTGAAGGAAGATATGACTGATGTGGGAAAGCAAGGACAACTTCTTGATGTGAAGGCTGGTTTTTACAGAAATTACCTGCTTCCTTTGGGAAAGGCACAACTTGTTACACCCCAGCTACTCAAGGAAATGAAGATAGAAGAAGAAAGAATTGAGGCTGAGAAAAGACGGGTAAAAGAAGAGGCACAACAACTTGCTCTAATTTTTGAAGCTGTTGGGGCTTTCAAGGTGAAGCGTAAAGGTGGTAAAGGAAAACAAATTTTTGGAAGTGTCACTGCTCAAGATCTTGTTGACATAATCAAGGCACAGCTTCAAAGGGAGGTGGACAAGAGAATTGTTGATCTTCCAGAGATCAGGGAAACAGGAGAATATATTGCAGAGTTAAAGCTTCACCCAGAAGTTACAGCTAGAGTGAAGTTGAACGTTTTTGCCAACTAA 591 0.423 MASPLSSLSSSSSSLFPHTFSGSSKVPIHFPNKTAHFLVLAQKKAKKTRKIILKEDMTDVGKQGQLLDVKAGFYRNYLLPLGKAQLVTPQLLKEMKIEEERIEAEKRRVKEEAQQLALIFEAVGAFKVKRKGGKGKQIFGSVTAQDLVDIIKAQLQREVDKRIVDLPEIRETGEYIAELKLHPEVTARVKLNVFAN* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00400 196 SUPERFAMILY Ribosomal protein L9 C-domain 108 195 IPR036791 -
Lapu11g00400 196 Coils Coil 92 119 - -
Lapu11g00400 196 ProSitePatterns Ribosomal protein L9 signature. 61 88 IPR020070 -
Lapu11g00400 196 Hamap 50S ribosomal protein L9 [rplI]. 49 196 IPR020594 GO:0003735|GO:0005840|GO:0006412
Lapu11g00400 196 Gene3D - 50 108 IPR036935 -
Lapu11g00400 196 Gene3D - 109 196 IPR036791 -
Lapu11g00400 196 Pfam Ribosomal protein L9, N-terminal domain 50 95 IPR020070 -
Lapu11g00400 196 PANTHER 50S RIBOSOMAL PROTEIN L9 34 195 IPR000244 GO:0003735|GO:0005840|GO:0006412
Lapu11g00400 196 Pfam Ribosomal protein L9, C-terminal domain 111 194 IPR020069 -
Lapu11g00400 196 NCBIfam 50S ribosomal protein L9 50 195 IPR020594 GO:0003735|GO:0005840|GO:0006412
Lapu11g00400 196 FunFam 50S ribosomal protein L9 110 196 - -
Lapu11g00400 196 SUPERFAMILY L9 N-domain-like 50 105 IPR009027 -
Lapu11g00400 196 FunFam 50S ribosomal protein L9, chloroplastic 50 109 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00400 K02939 - gmx:100500390 286.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00400 11 7123867 7127210 Lapu11g00400 11 7123867 7127210 ECH