Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00398 ATGGCACTCCCACGCTCCATCTCTGCGTTATCAACCACACTCACGCTTTCCTCCCCAATTAGCAAACCCACCACCAACAAAGTTAATTCCTTTCCCTACTTCTCGAACAAGGGTACGCAATTTTTCAGGAAACAAACGCGACCCAGAAGCGGAAGAAGCCTTTTGCTTACTCCTGCACGCGTTGCCGCGCCACCCTCGACGGTTGAAACCGATCAATCATTCCTTGAAACCGAAAAGGGGGAGACTGAGGAAGAGTTTAACGATGAGAGCTCTTCCTCTAAGTTCTCCTGGAGGGACCACTGGTACCCTGTTTCGTTGATTGAGGATCTGAACCCTCTCTTGCCCACACCGTTTCAGCTTCTGGGCCGTGAAATCGTGCTCTGGTATGACAAGTCCATTTCCCAATGGGTTGCTTTTGATGACAAATGCCCCCATCGTCTTGCTCCTTTATCTGAAGGAAGGATTGATGAAGATGGGAAGTTGCAGTGTTCTTATCATGGGTGGTCTTTTGATGGTTGTGGATCTTGTGTTAAGATTCCTCAGGCTGCATCTGAAGGCCCGGAAGCACGTGCTATTCGATCTCCTAAAGCGTGTGCCACTAGGTTCCCTACTCTAGTGTCCCAGGGATTGCTCTTTGTTTGGCCTGATGAGAATGGTTGGGAGAAAGCAAATGCCTCCAAGCCTCCAATGTTGCCTGATGACTATGACAAAGCGGAGTTTGCGACGGTCAACATTCAGCGTGATCTGTTCTATGGTTACGATACTCTAATGGAGAATGTCTCTGATCCTTCTCACATTGATTTTGCTCATCACAAGGTCACAGGAAGGAGAGACAGAGCTAAGCCTCTGCCGTTTAAGATGGATTCTCGTGGTTCATGGGGCTTCTCTGGAGCGAATGAAGGGAACCCAAAAATCAGTGCCAAATTTGTTGCACCATGTTATTATATGAACAAGATTGAGATTGATACCAAACTCCCTGTAGTTGGTGACCAGAAATGGGTTGTATGGATATGTTCCTTCAATGTTCCCATGGCATCTGGTAAGACTCGCTCCATTGTTTGCAGTGCTCGAAACTTCTTCCAGTTCTCAGTGCCAGGGCCTGCCTGGTGGCAAGTCGTTCCTAGATGGTATGAGCATTGGACATCGAATAAGGTATATGATGGTGACATGATAGTCCTTCAAGGCCAAGAGAAAATCTTCCTTTCACAAACCAAGGAAGGAGCTGACATTAACAAACAGTACACCAACATCACCTTCACACCAACACAGGCAGATCGCTTTGTCTTGGCATTTCGAAACTGGCTGAGGCGACATGGCAATGGCCAACCAGAATGGTTTGGCAACAGCAGCGACCAACCATTGCCATCAACTGTTTTATCAAAACGTGAGATGTTGGATAGATTTGAACAGCATACTCTCAAATGTTCATCATGTAAAGGAGCTTATGAGGGATTCCAAAGATGGCAAAAAGTCCTAATTGGTGCAACAGTTGTGTTTTGTGCAACATCAGGGATTCCAGCAGATGTCCAGTTGCGTGTACTTTTGGCTGGACTTGCAATTGTCAGTGCAGCCATAGCTTTTTCCCTAAACCAACTCCAAAAGAATTTTGAATTTGTAGATTACGTGCATGCCGAAATCGAATAA 1644 0.4635 MALPRSISALSTTLTLSSPISKPTTNKVNSFPYFSNKGTQFFRKQTRPRSGRSLLLTPARVAAPPSTVETDQSFLETEKGETEEEFNDESSSSKFSWRDHWYPVSLIEDLNPLLPTPFQLLGREIVLWYDKSISQWVAFDDKCPHRLAPLSEGRIDEDGKLQCSYHGWSFDGCGSCVKIPQAASEGPEARAIRSPKACATRFPTLVSQGLLFVWPDENGWEKANASKPPMLPDDYDKAEFATVNIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLPFKMDSRGSWGFSGANEGNPKISAKFVAPCYYMNKIEIDTKLPVVGDQKWVVWICSFNVPMASGKTRSIVCSARNFFQFSVPGPAWWQVVPRWYEHWTSNKVYDGDMIVLQGQEKIFLSQTKEGADINKQYTNITFTPTQADRFVLAFRNWLRRHGNGQPEWFGNSSDQPLPSTVLSKREMLDRFEQHTLKCSSCKGAYEGFQRWQKVLIGATVVFCATSGIPADVQLRVLLAGLAIVSAAIAFSLNQLQKNFEFVDYVHAEIE* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00398 547 Gene3D - 240 442 - -
Lapu11g00398 547 SUPERFAMILY Bet v1-like 208 443 - -
Lapu11g00398 547 SUPERFAMILY ISP domain 94 219 IPR036922 GO:0051537
Lapu11g00398 547 CDD Rieske_RO_Alpha_PaO 89 224 - -
Lapu11g00398 547 MobiDBLite consensus disorder prediction 62 90 - -
Lapu11g00398 547 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 101 213 IPR017941 GO:0051537
Lapu11g00398 547 Pfam Pheophorbide a oxygenase 309 404 IPR013626 GO:0010277
Lapu11g00398 547 MobiDBLite consensus disorder prediction 74 90 - -
Lapu11g00398 547 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 47 493 - -
Lapu11g00398 547 Gene3D - 96 239 IPR036922 GO:0051537
Lapu11g00398 547 Pfam Rieske [2Fe-2S] domain 100 183 IPR017941 GO:0051537
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00398 Lapu-Chr11 7108968 7114242 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00398 K13071 - gmx:778121 1036.56