Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00367 ATGTTCTTGGTGGTAAGACCATGTGGTTCTTCTTCTGTGCGTATTCATCATCTTCACCCCACTCCCCCATCGCACCGTAGCAGAAACGTCGTCGTTAGATGCTCCCTCAGCAGCGTGCAGGAGAAGAAAGAAAAGGTTGAATTGGATTCAGAGCTGCAATCTTCGCTGGCATTTCCGCCGATCAGGGCGGCCAAGAGGGTGGTTCTGGTGAGGCACGGTCAAAGCACGTGGAACGCGGAGGGGAGGATCCAAGGAAGCTCTAATTTCTCTGTTCTGACGAAGAAGGGGGAGTCTCAGGCTGAGACTTCACGCCAAATGCTCATCGACGACCAATTCGATGCCTGCTTTGCCAGTCCTTTGGCTCGATCCAAGAAAACCGCTGAAATCATTTGGGGATCTCGCCAGGAACCCATCATTCCCGACTTTGATTTGAGGGAAATCGATTTGTACTCCTTTCAAGGTCTGCTGAAGCATGAGGGGAAAGCAAAATTTGGTTCTGCTTATCGTCAATGGCAGTTGGATGCTGGGAATTTCATCATTGATGGTCATTATCCAGTTAGAGAGTTGTGGGAACGTGCTGGAAGCTGCTGGACTAAAATCTTAGCTCATGATAGCAGGTCTGTTCTTGTGGTTGCTCACAATGCTGTTAATCAGGCTCTTGTTGCCACAGCAATTGGTCTGGGGGTCGAGTATTTCAGAACATTACTTCAGAGCAATTGTGGTGTTAGTGTGCTGGATTTCATCCCGAGATCTGAGGGTGGATCTCCGCATATTTGCCTTAACCGCTTAAATCAGACCCCTGGTTCACCTATTGCTGGTGGGAAATCTGGAGGTCGAGAGACAAGTAAGCGAATCATACTTGTTTGTAATGGATCAACACAAGGAAATACAGAGGATGTTTTTCCTTTTGGTGGTGATCTACCATTGAACATGCTTGGTGTCATACAGTCCCAGAAATCTGCTGAGCTACTACTTGATTTGAAAGTGAGTTCCATAATAAGCAGTCCTAACAAAGCCTGTGTTGGGACAGCCACGGTCATCTCCCAGGTACAAGAAGCTGCAGACTGCTTGGGTGCTGACTGTGTGCCTCGATATGTTGAGATGAAGCAGACGGGGAATCTTGATGTTGAAACTATCTTCAAACAATCTGAAATGGATATATCCAATTTTCCGCCATTTCAACCTGGTTGGTTAAATAGAGTTGATGATGGATTGAGAACAACATTATGGGATCAATCTGGAAAAGCTTGGCGATCTTTGTTGGATGAAATATCTGATGAATCTAAGCCAGAAGAAGTTATAGTGGTAGTTGGTCATCCTGCGATCCACATAGCACTAATGGGGCACTGCCTTAACTTGACCAAAGAATGGTTGGGATCATTTCATCTTGATGCAGGGAGCGTTAGTGTTCTTGACTTCCCTGATGGAGCTAAGGGAAAAGGTGTTATCAGGTGCATAAATTATACTGCACATCTGGGGAGATGGTCCATACCTATCACAAGATCAACAGAAGATGGTGAAGAGTTTTAA 1530 0.4595 MFLVVRPCGSSSVRIHHLHPTPPSHRSRNVVVRCSLSSVQEKKEKVELDSELQSSLAFPPIRAAKRVVLVRHGQSTWNAEGRIQGSSNFSVLTKKGESQAETSRQMLIDDQFDACFASPLARSKKTAEIIWGSRQEPIIPDFDLREIDLYSFQGLLKHEGKAKFGSAYRQWQLDAGNFIIDGHYPVRELWERAGSCWTKILAHDSRSVLVVAHNAVNQALVATAIGLGVEYFRTLLQSNCGVSVLDFIPRSEGGSPHICLNRLNQTPGSPIAGGKSGGRETSKRIILVCNGSTQGNTEDVFPFGGDLPLNMLGVIQSQKSAELLLDLKVSSIISSPNKACVGTATVISQVQEAADCLGADCVPRYVEMKQTGNLDVETIFKQSEMDISNFPPFQPGWLNRVDDGLRTTLWDQSGKAWRSLLDEISDESKPEEVIVVVGHPAIHIALMGHCLNLTKEWLGSFHLDAGSVSVLDFPDGAKGKGVIRCINYTAHLGRWSIPITRSTEDGEEF* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00367 509 SUPERFAMILY Phosphoglycerate mutase-like 284 499 IPR029033 -
Lapu11g00367 509 Gene3D - 65 267 IPR029033 -
Lapu11g00367 509 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 69 78 IPR001345 GO:0003824
Lapu11g00367 509 PANTHER BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED 280 477 - -
Lapu11g00367 509 Gene3D - 277 496 IPR029033 -
Lapu11g00367 509 Pfam Histidine phosphatase superfamily (branch 1) 285 477 IPR013078 -
Lapu11g00367 509 Pfam Histidine phosphatase superfamily (branch 1) 67 248 IPR013078 -
Lapu11g00367 509 SUPERFAMILY Phosphoglycerate mutase-like 65 261 IPR029033 -
Lapu11g00367 509 CDD HP_PGM_like 66 247 IPR013078 -
Lapu11g00367 509 SMART PGAM_5 284 446 IPR013078 -
Lapu11g00367 509 SMART PGAM_5 66 220 IPR013078 -
Lapu11g00367 509 FunFam Putative 2-carboxy-D-arabinitol-1-phosphatase 276 496 - -
Lapu11g00367 509 FunFam Phosphoglycerate mutase 65 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00367 Lapu-Chr11 6715147 6720390 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00367 K22200 - gmx:100798495 911.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00367 11 6715147 6720390 Lapu11g00367 11 6715147 6720390 ECH