Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00336 ATGGAATTGGGAAGCATAATCCACATCCTCGAGGGCAAGAACATTCTGGTCGTTGGTGCTGCTGGTTTCCTTGCCAAAATTTTTGTGGAGAAGATACTCAGAGTGCAACCAAATGTAAAGAAACTTTATCTTCTTTTTAGAGCCACAGGTGCTGAATCTGCCACTCGAAGATTGCATAACGAGATTATAGGAAAGGACCTCTTTAAATTATTGAAGGAAAACCTTGGTGCAAAGTTCGATAACTTTGCTTCAGAAAAGTTGATTCCTGTGCCTGGGGACATTTCTCAAGAGGGCTTGAATTTGAATGATCCTGTTCTACGGGAAGAAATTTGCAATCAAACTCATTGCATAATCAATTTTGCTACAACAACCAAGTTTGATGAAAGATACGATGTTGCATTGGGAATAAATACATCAGGAGTGAGACATGTTATGAACTTCGCCAAAAATTGTATTAAGCTGAAAGTGTTTGTCCAGGTGTCGACAGGTTAG 492 0.3943 MELGSIIHILEGKNILVVGAAGFLAKIFVEKILRVQPNVKKLYLLFRATGAESATRRLHNEIIGKDLFKLLKENLGAKFDNFASEKLIPVPGDISQEGLNLNDPVLREEICNQTHCIINFATTTKFDERYDVALGINTSGVRHVMNFAKNCIKLKVFVQVSTG* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00336 163 Gene3D - 7 163 - -
Lapu11g00336 163 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 162 IPR036291 -
Lapu11g00336 163 Pfam Male sterility protein 18 162 IPR013120 -
Lapu11g00336 163 PANTHER MALE STERILITY PROTEIN 2-RELATED 6 162 IPR026055 GO:0080019
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00336 Lapu-Chr11 6395661 6397213 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00336 5 163 Acyl Lipid Metabolism Gene Families AT3G44560 54.375 5.36e-55 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00336 K13356 - gmx:100788994 266.929