Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00323 ATGGACCAGCTTCCTGTTGAAGTGATTGGGAACATTCTGTCTCACTTGAGGGCTGCACGAGATGTGGTGATAGCCTCTGCAACATGCAGGAAATGGCGACTAGCGTGCTGCAGACACCTTCATACCCTCTCCTTCAGCTCCAAAGATTGGCCCATTTATCGAGATTTGACGACTACCCGCCTTGAGATTTTGATCACACAAACCATTTTTCAGACCTCAGGGTTGCAGGCTCTCTCCATTTTGATGGAAGATGTGGATGAATTCTCGGCTTCAACGGTTACTGCTTGGCTGTTGTATACCAGGGAAACTTTGAGGCAATTGCATTATAATGTCAAGACTATGCCTAATGTTAACATTCTTGAAATATGTGGCAGGCACAAGCTGGAAATACTAGATCTAGCTCATAATTCCATTGTGGGGGTTGAGCCTAATTATCAGCGATTCCCTTGCTTGAAGTCTCTTTCCCTTAGTTATGTCAGTATATCTGCATTGGATCTGAATCTTTTTGTATCTGCCTGTCCGAAGATTGAAGCTTTGGAGCTTGTCAATCCTGAGATTGCAATGTCTGATGCACAGGTGACTGTTGAATTGAGTAGTTCAACGCTGAAGAGTGTGTATGTAGAAGCAATCAGTTTGGACAAGTTTATATTGGAGGCTGATGGGCTTGAGACCTTGCACTTGAAAGATTGTGCTCTTGAGTTTTTTGAACTCATTGGCAAGGGGAACTTGAAGCATTTTAAGATAGATGATGTTAGTGTTATACATCTTGATATTGGCGAGACAGTTGAGGATCTTGAGACTGTGGATATCAGCAACTTCACAATTATATGGCCAAAGTTTTACCAGATGATTTCAAGATCATCGAATTTAAAGAGGCTTCGACTTTGGGACGTGATGTTTGACGACGAGGATGAAGTTGTGGATTTGGAAACAATTGCAACTTGCTTTCCTTACCTGAGCCATTTATCTCTGAGTTATGATGTGAGAGATGGAGTTCTTCACTATGGTTTACAAGGCTCTTCCTATCTGGAGAATGTTGTTGTCTTGGAGCTTGGTTGGACTGTGATCAATGATCTGTTCTCCCATTGGGTTGAGGGGCTGCTTAAGCGATGCCCCAATCTCAAGAAGTTGGTCATTCATGGGATTGTTTCTGAGGCAAAGTCTCATGAAGAATGCCAGATGTTAGCCAGTTTCACCACATCCATGGTTGAGATGATGAGGAGATACACACATGTAGATCCACATTTTAAGTATGAATAG 1260 0.4262 MDQLPVEVIGNILSHLRAARDVVIASATCRKWRLACCRHLHTLSFSSKDWPIYRDLTTTRLEILITQTIFQTSGLQALSILMEDVDEFSASTVTAWLLYTRETLRQLHYNVKTMPNVNILEICGRHKLEILDLAHNSIVGVEPNYQRFPCLKSLSLSYVSISALDLNLFVSACPKIEALELVNPEIAMSDAQVTVELSSSTLKSVYVEAISLDKFILEADGLETLHLKDCALEFFELIGKGNLKHFKIDDVSVIHLDIGETVEDLETVDISNFTIIWPKFYQMISRSSNLKRLRLWDVMFDDEDEVVDLETIATCFPYLSHLSLSYDVRDGVLHYGLQGSSYLENVVVLELGWTVINDLFSHWVEGLLKRCPNLKKLVIHGIVSEAKSHEECQMLASFTTSMVEMMRRYTHVDPHFKYE* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00323 419 CDD F-box_SF 2 37 - -
Lapu11g00323 419 SUPERFAMILY RNI-like 73 381 - -
Lapu11g00323 419 SUPERFAMILY F-box domain 2 54 IPR036047 GO:0005515
Lapu11g00323 419 Pfam F-box-like 2 39 IPR001810 GO:0005515
Lapu11g00323 419 Gene3D Ribonuclease Inhibitor 112 404 IPR032675 -
Lapu11g00323 419 Gene3D - 1 48 - -
Lapu11g00323 419 PANTHER F-BOX PROTEIN-LIKE 2 382 - -
Lapu11g00323 419 SMART fbox_2 4 45 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00323 Lapu-Chr11 6248150 6250258 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00323 - - vun:114169858 798.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00323 11 6248150 6250258 Lapu11g00323 11 6248150 6250258 ECH