Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00322 ATGGCTAAACCCCACCACCTCATTCTCCTTTTTCTTCTCTGTGCCATTCTACAATTCTCTTCATCTTCACCCTCCGATCACCTTTATAATGTTGGAGAACCCGTCCCATTGTTTGTCAACAAAGTGGGACCCTTCAACAACCCCAGTGAGACCTATGAATACTATGATTTGCCATTCTGCGCCCCAGTCCCAATTGTCAAAAAGAAAGAGTCCTTGGGGGAAGTTCTCAATGGTGATCGTTTGAGCAATGCTCTGTATGAGTTCAAGTTCCGAGAGGACAAGATTGATGAGACCTTGGGCACAAAGAAGCTTACAATTGATCAAATTGCCCTCTTTAAGCGAGCTATAAACCGTGAATTTTACTTTCAATTTTACCTGGATGATCTTCCATTCTGGGGCTTCATTGGGAAACTTGAAGAGGATGGGTGGACTCCTGGTGGAGGAGGACCAAACTATTACCTTTTTACACATATTCAATTTGATGTTCTTTACAATGGGAATCAAATCATTCAAGTAAATGCATTTAGCGATCCAAATCGTGCTGTAGATATTACTAAAGATGTTGGTATTGATGTGAAGTTCACTTATTCTGTTACCTGGAATGCCACTAAAATACGTTTTGAGAACAGGATGGATAGATACTCAAGGGCTTCGTTGATGTCTGTGCATCAGCAAGTTCATTGGTTCTCATTCATCAACTCAATTGTCATCATTTTGCTTTTGACTGGTTTGCTTGCCCTGCTTTATTTGAGACATCTGAGGAGTGATTTGAAAAAGTACTCTAATGCAAATGAAGAAGATAAAGAGGTTGGTTGGAAGTCCCTCCATGGCGATGTATTCAGACCTCCTCCTAACTCATCCTTACTTTTTGCTGTTGTTGGAATTGGTACCCAATTGCTAATCTTGCTTTGTTTCTTGCTGTTTCTAGCACTTATTGGTACCCTCTATCCCTACAATCGTGGAGGACTGTTAAATTGGCTTGTCTTGCTGTATGCTCTTTTTTCTGTATTTGCTGGCTACACTGCAGCATCCTTCCATGGCCAGTATGCTGAGAATGGATGGGAAAGGACCGTTGGTCTTGCAGGGGTTCTTTACACTGGACCAGTGTTTGTTGCAGCCTCTATCCTCAACATAGTTGCAATCTCTTACAGGGCTACATTTGGAGTCCCATTTGGCTCCATTATTGTGATTCTTGTTTTATTCACATTTCTCGCCATCCCTTTGCTTGCATTTGGTGGAGTGATCGGATACCGTCTTGGATCTAAATTTCAAAGCCCCTCTGCTACGAAGAGACATCCAAGAGACATTCAACAGCTTGCTTGGTACAGGAGAACACCATTTCTAATGTTTGTTGGGGGTCTTGTGCCTTTTAGTGCAATTGTCCTGCAACTACACCAAGTGTATGCTAGTATGTGGGGCTACAAAATATACACTCTTCCTAGCATTTTGTTTGCCACATTCATTCCTGTCATTGTGATTATTTCACTTGTCAGTATTGGCTTGACATACATTCAGCTATCTGTGGAAGACCATGAATGGTGGTGGAGGTCAGTGCTGTGTGGTGGCTCAACAGCCATTTTCATGTTTGGGTATGGTATCTACTTCTATGTGAGATCAAATATGAGTGGATTCTTGCAGCTATCCTTCTTTATTGGCTATAATGCATGCCTATGCTATGCTTTCTTCCTAATATTTGGTGCCATCAGTTTCCGAGTTTCATTTCTCTTTGTTCGCCTTATATACCACAATGTTAAAAGAGAGTAA 1764 0.4155 MAKPHHLILLFLLCAILQFSSSSPSDHLYNVGEPVPLFVNKVGPFNNPSETYEYYDLPFCAPVPIVKKKESLGEVLNGDRLSNALYEFKFREDKIDETLGTKKLTIDQIALFKRAINREFYFQFYLDDLPFWGFIGKLEEDGWTPGGGGPNYYLFTHIQFDVLYNGNQIIQVNAFSDPNRAVDITKDVGIDVKFTYSVTWNATKIRFENRMDRYSRASLMSVHQQVHWFSFINSIVIILLLTGLLALLYLRHLRSDLKKYSNANEEDKEVGWKSLHGDVFRPPPNSSLLFAVVGIGTQLLILLCFLLFLALIGTLYPYNRGGLLNWLVLLYALFSVFAGYTAASFHGQYAENGWERTVGLAGVLYTGPVFVAASILNIVAISYRATFGVPFGSIIVILVLFTFLAIPLLAFGGVIGYRLGSKFQSPSATKRHPRDIQQLAWYRRTPFLMFVGGLVPFSAIVLQLHQVYASMWGYKIYTLPSILFATFIPVIVIISLVSIGLTYIQLSVEDHEWWWRSVLCGGSTAIFMFGYGIYFYVRSNMSGFLQLSFFIGYNACLCYAFFLIFGAISFRVSFLFVRLIYHNVKRE* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00322 587 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 18 585 IPR004240 GO:0016020
Lapu11g00322 587 Pfam Endomembrane protein 70 51 544 IPR004240 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00322 Lapu-Chr11 6239249 6243395 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00322 22 587 Miscellaneous Gene Families AT2G01970 49.298 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00322 K17085 - gmx:100818419 1037.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00322 11 6239249 6243395 Lapu11g00322 11 6239249 6243395 ECH