Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00319 ATGGCAACCTTGTCAACTGTGAATGTTTTCTCCCATTGTCTGTTTCAGACTCCAAGCAAAAATCAATTCACTGTTGCCACCACAGTGAAGTGCCCTTCTTCTCTTGGGTCTGTAAAGAGTGTTTCTAGATCTTTTGGCTTGAGGTCATCCTCTTCATTTAGAGTCACTGCCATGGCGTCTTACAAGGTTAAGCTGATTGGCCCAGATGGAAAAGAGAATGTATTTGAAGCATCAGAGGATACTTACATCCTAGATGCAGCAGAGGATGCTGGACTTGAACTTCCTTACTCCTGCCGTGCGGGAGCTTGCTCAACCTGTGCTGGAAAGATTGTTACTGGTTCAGTGGATCAGTCTGATGGCTCATTCCTTGATGAGAAACAAGTGAAGGAAGGCTTTGTACTTACCTGTGTCTCCTATCCAGCTTCAGATTGTGTAATTGAAACTCACAAGGAAGGAGAGCTCTACTGA 468 0.4466 MATLSTVNVFSHCLFQTPSKNQFTVATTVKCPSSLGSVKSVSRSFGLRSSSSFRVTAMASYKVKLIGPDGKENVFEASEDTYILDAAEDAGLELPYSCRAGACSTCAGKIVTGSVDQSDGSFLDEKQVKEGFVLTCVSYPASDCVIETHKEGELY* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00319 155 NCBIfam ferredoxin [2Fe-2S] 59 155 IPR010241 GO:0009055|GO:0022900|GO:0051537
Lapu11g00319 155 PANTHER FERREDOXIN 27 155 - -
Lapu11g00319 155 ProSiteProfiles 2Fe-2S ferredoxin-type iron-sulfur binding domain profile. 61 152 IPR001041 GO:0051536
Lapu11g00319 155 FunFam Ferredoxin 59 155 - -
Lapu11g00319 155 CDD fer2 63 147 IPR001041 GO:0051536
Lapu11g00319 155 Pfam 2Fe-2S iron-sulfur cluster binding domain 68 140 IPR001041 GO:0051536
Lapu11g00319 155 SUPERFAMILY 2Fe-2S ferredoxin-like 56 154 IPR036010 GO:0051536
Lapu11g00319 155 ProSitePatterns 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 98 106 IPR006058 GO:0051537
Lapu11g00319 155 Gene3D - 58 155 IPR012675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00319 Lapu-Chr11 6210801 6213407 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00319 K02639 - gmx:100785611 258.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00319 11 6210801 6213407 Lapu11g00319 11 6210801 6213407 ECH