Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00315 ATGCTGAGTCGACCATATGCTTTTGGTTGTGTCCTGCGATTAAGAACCTCAACGGAATTTAAACCTGGCAATTCTTATGGTCACTTCTTTCCAGATCCACAGTATGAAAATGTTCAACACATCATATGTTGTGATTCTTATGCTACATATGCTTACGACTTTGTGTTTGAGAACAACATTGGATTTTCAAGAACTAAATCAGATGTTCCTACAATTCAGATTGCATTTCAGTACTCTGTTGTAGTTCCTCCTCAGCAACTTTCTGATTCAGGAGGGGTTTCGACAAATAGAACCAAGCATTCCCTTCAGCGCCGGCTAAGGATCCGAACATTGCAATATGGTGTTGCTCAGAACATTCATGAGCTTTATGATAGCTGTGATCCTGAAGTTGTTCTTTCTCTGCTGGTTCACAAGGTTATTTTAGCCTCCTTGGAGGAAGGAGTTAGGGAGGGTAGAATTTTGCTTCAAGAGTGGCTAGTGATCCTTACAGCTCAGTACAATGATGCATATAAGCTTATTCAGTATAGCAATGGAAGTTCTTTGAGATCTCAGATTGACGTTGCATTGTCTCAATGTCCTCAATTGCAGCCCCTCCCACGCCTAATTTTTGCTCTCCTTCGAAATCCTCTTCTACGCTTTCATGAAGAAGGGGTTCATCCCGATTATCGCATCTATCTTCAATGCCTCTTCAGCATGTTGGAACCCAGTTCCCTTCATCGTGCTGTGTATCCTGTGTTGACATCATATGCTACTCCAGATAAACAAGCATATCCTCGCCATTCATTGAGTCGTGCCGCACTGATTACCAGCGGCAGTCCGATATTTTTCCTTGATGCATTCACTATTCTGATTGTGTTTTACTCTTCGACTGCAGACCCGACAATTCCTTTTCCTCCACCCCATGATTGTTTGTTAAGGACTACAATCAACAAATTGAAGCAAGATAGATGCATCACTCCCAAACTCATTTTTATCCGAGGAGGGCAGGACGATGCCTCAATTTTTGAGAACTTTCTGATCGAAGAGCAGGATGTTGATGGAAGTGGTCTAACCAGTGTGATGGGTTTTGTTTCCTTCCTAGAAGATATTACACAAAAGGTTTTGGAGTTCGTGAAATAG 1119 0.42 MLSRPYAFGCVLRLRTSTEFKPGNSYGHFFPDPQYENVQHIICCDSYATYAYDFVFENNIGFSRTKSDVPTIQIAFQYSVVVPPQQLSDSGGVSTNRTKHSLQRRLRIRTLQYGVAQNIHELYDSCDPEVVLSLLVHKVILASLEEGVREGRILLQEWLVILTAQYNDAYKLIQYSNGSSLRSQIDVALSQCPQLQPLPRLIFALLRNPLLRFHEEGVHPDYRIYLQCLFSMLEPSSLHRAVYPVLTSYATPDKQAYPRHSLSRAALITSGSPIFFLDAFTILIVFYSSTADPTIPFPPPHDCLLRTTINKLKQDRCITPKLIFIRGGQDDASIFENFLIEEQDVDGSGLTSVMGFVSFLEDITQKVLEFVK* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00315 372 PANTHER SEC24-RELATED PROTEIN 2 365 - -
Lapu11g00315 372 Gene3D Sec23/Sec24 helical domain 112 252 - -
Lapu11g00315 372 Pfam Sec23/Sec24 helical domain 127 239 IPR006900 GO:0006886|GO:0006888|GO:0030127
Lapu11g00315 372 SUPERFAMILY beta-sandwich domain of Sec23/24 6 126 - -
Lapu11g00315 372 Gene3D - 1 111 - -
Lapu11g00315 372 SUPERFAMILY Helical domain of Sec23/24 127 243 IPR036175 GO:0006886|GO:0006888|GO:0030127
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00315 Lapu-Chr11 6181099 6190825 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00315 - - gmx:100807557 731.095
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00315 11 6181099 6190825 Lapu11g00315 11 6181099 6190825 ECH