Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00311 ATGGGCAAAAAGGTAAAATGGAGCTGGAGTTCGGCGATAATCGGAGCAGCATCTGCAGTGGCAGCCACCGCCCTAATCTCCGCCAAACCGAAGGACCCAACGTTCCACCTCATATCCATAAACTTCACTTCCCTCAAACTCAACCTTCCTCTCCTCGACGCAGAGGTTCTCCTCACCGTCCACGTCACCAACCCCAACATTGCTCCCATCCACTACTCCTCCACCTCCATGTCCATCTTCTACGAGGGTTCCCTTCTTGGCTCGGCTCAGGTCCAAGCCGGCTCCCAGCCGCCCCGCTCCTGTCAGCTCCTCCGCCTCCCCGCCCGCCTCCACGCGCTCCAGCTCGCGCACCACGCCACGCGCTTCCTCCACGACGTCGCGCGCCGCGAGATGGTCCTCGACGCCGCCGTCGACATCGCCGGCACCGCCAGGGTCATGTGGTGGGACCACAACTTCAAGGTCCACGTCGACAGCCACGTCACCGTTGATCCCGTCTTTCTCGACGTCATTGATCAGGAGAACACCTCCGAACTTGAAGTCTTCACCACTGCTTCGGCGTAG 561 0.6078 MGKKVKWSWSSAIIGAASAVAATALISAKPKDPTFHLISINFTSLKLNLPLLDAEVLLTVHVTNPNIAPIHYSSTSMSIFYEGSLLGSAQVQAGSQPPRSCQLLRLPARLHALQLAHHATRFLHDVARREMVLDAAVDIAGTARVMWWDHNFKVHVDSHVTVDPVFLDVIDQENTSELEVFTTASA* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00311 186 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 8 165 - -
Lapu11g00311 186 SMART why 40 155 IPR013990 GO:0009269
Lapu11g00311 186 SUPERFAMILY LEA14-like 23 161 - -
Lapu11g00311 186 Gene3D - 14 165 - -
Lapu11g00311 186 Pfam Late embryogenesis abundant protein 59 156 IPR004864 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00311 - - gmx:100782945 307.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00311 11 6159157 6161715 Lapu11g00311 11 6159157 6161715 ECH