Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00304 ATGACTCGTGTGTTGGTTCAGAGGGGTTCTTCCGGTGCTGGTTCTTCTTCCAACGCGAACCGGAGTGCTGGGTCTTCTTCCAATCCCTCGGCGCGCCCAGAGCCGCAGGTTCTGCTTTCGCCGGAGAATATCGACGAGGCTGTTGTTGCTGTGCCAGATGAGGTTTTAGAAAGTTGCGATAAGGGGAAGACTGAGGAGAGTGTTCATTTTGAGCAGGGTGATGGGTCGTGTGATGATGATGTGGCTGCTGCTGCTGCTGTTGTTGTTGAGAGTGATGTTAGGGAGGAGTTTGTGAAGGGGTTGAGTGGGCTGAGATTTGGTGAAAGGGTTGTTGCAGAGTGTGAGGGCTCGAGTGGGGATTCTTCTTCCCTACCTCTTGGTGTTGGTTCGTGTCCCCCGCCGCCTCCGGTGCCGCCTCCTAAGCCTTCTTTGGCGGGGAACTTGAATCCAAGGAGAAGTATGACCGGGAGTTTGAATTCACCTAGTGTGGGATCGTCGAGGAGGACATCTGCGTGGCCGGTTGTTCCGGCAAGGACTTCGCCTGCTGGGTCAAGGCCGTCTTCTCCCAGGTCTCATAATGAAAGTGAGGGGTACAATAGTGCTGATGAGCAGAAGCCTTGCCTGGTTTCATCATATGATGATTTTGAAAGGGAGCGGCAGTTTGAAATTGATATCAGAAGGGCAAAAGGTTATGAAGTAAAAAAAATGATGGAGGATGGAAATTGTCTTTTCCGAGCTGTTGCAGATCAGGTGTATGGGGACTCTGAACTGTATGATTTGGTCAGACAGATGTGCATAGATTATATGGAGCGAGAGAGAGATCACTTTTCTCAGTTTATAACTGAAGGATTCACATCTTACTGCAAGAGAAAAAGAAGAGATAAGGTTTATGGAAACAATGTTGAGATCCAAGCCATGTGTGAAATGTATAATCGTCCAATTCACATATACTCCTACAGCATAGAACCTATCAATATCTTTCATGGCAGCTACAACACTGACACGCCACCAATTCGATTGAGTTATCATCATGGGAATCATTACAACTCCCTTGTTGACCCACGGCGCTTGACAATTGGTGCTGGGCTTGGGTTCAGCAGTCTTCGTGGAACAAATGTTGACAAAGATCAAGTCAAGGCTGCTATTAAATCTCAACAGGACGAACTGATCAATAATGCACTTTTAGCTGAGGGTAGGTTTTACTCTGATATTGAGCTCACAGAAAAGGAAATTGAACGCATGGTCATAGAAGTTTCTCGAGCTGAGTACCTTGCAGATAGTAGTACATTTAAGCAACAGCTTGGTGACAGAGAGTCCTCTACCTCGACCGCTGAACCGTCGTCTTCTGGAGCAACAGGGTCATCCGGCACTGATCGCAAGACAGAAAATGGAAAAGAGCATGGTTCTGATCTGAGTAGTGGCATGCAAATGTTACTGTCGATGGGATTCTCGTACATCCAAGCGATTGAGGCTTACAGCATATTTGGGGACGACGTTGATTCTATGGTTTGTTACCTCTTAGAAACCGGCAATAGCAGCAGACGTAAGGGCAAGGCCACTGAATGA 1566 0.4745 MTRVLVQRGSSGAGSSSNANRSAGSSSNPSARPEPQVLLSPENIDEAVVAVPDEVLESCDKGKTEESVHFEQGDGSCDDDVAAAAAVVVESDVREEFVKGLSGLRFGERVVAECEGSSGDSSSLPLGVGSCPPPPPVPPPKPSLAGNLNPRRSMTGSLNSPSVGSSRRTSAWPVVPARTSPAGSRPSSPRSHNESEGYNSADEQKPCLVSSYDDFERERQFEIDIRRAKGYEVKKMMEDGNCLFRAVADQVYGDSELYDLVRQMCIDYMERERDHFSQFITEGFTSYCKRKRRDKVYGNNVEIQAMCEMYNRPIHIYSYSIEPINIFHGSYNTDTPPIRLSYHHGNHYNSLVDPRRLTIGAGLGFSSLRGTNVDKDQVKAAIKSQQDELINNALLAEGRFYSDIELTEKEIERMVIEVSRAEYLADSSTFKQQLGDRESSTSTAEPSSSGATGSSGTDRKTENGKEHGSDLSSGMQMLLSMGFSYIQAIEAYSIFGDDVDSMVCYLLETGNSSRRKGKATE* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00304 521 MobiDBLite consensus disorder prediction 429 471 - -
Lapu11g00304 521 MobiDBLite consensus disorder prediction 148 173 - -
Lapu11g00304 521 SUPERFAMILY Cysteine proteinases 218 354 IPR038765 -
Lapu11g00304 521 FunFam OTU domain-containing protein 5 212 364 - -
Lapu11g00304 521 SUPERFAMILY UBA-like 465 511 IPR009060 GO:0005515
Lapu11g00304 521 ProSiteProfiles OTU domain profile. 231 354 IPR003323 -
Lapu11g00304 521 MobiDBLite consensus disorder prediction 1 34 - -
Lapu11g00304 521 MobiDBLite consensus disorder prediction 181 195 - -
Lapu11g00304 521 MobiDBLite consensus disorder prediction 429 458 - -
Lapu11g00304 521 MobiDBLite consensus disorder prediction 1 44 - -
Lapu11g00304 521 MobiDBLite consensus disorder prediction 113 203 - -
Lapu11g00304 521 PANTHER OTU DOMAIN CONTAINING PROTEIN 172 362 - -
Lapu11g00304 521 CDD OTU_plant_OTU6-like 227 353 - -
Lapu11g00304 521 Pfam OTU-like cysteine protease 239 348 IPR003323 -
Lapu11g00304 521 Gene3D - 213 364 - -
Lapu11g00304 521 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 468 509 IPR015940 -
Lapu11g00304 521 MobiDBLite consensus disorder prediction 128 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00304 Lapu-Chr11 6099465 6107120 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00304 K12655 - gmx:100809162 813.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00304 11 6099465 6107120 Lapu11g00304 11 6099465 6107120 ECH