Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00279 ATGGAAAATCATGGTGGGAAGAAGAGAGTGGTGATCATAGGAGGAGGTGTTGCGGGTTCTCTCGTCGCTAAATCTCTCCAATTCACTGCCCATGTTACCCTAGTTGATCCGAAGGAATATTTTGAGATTACATGGGCAAGTTTGAGGTCAATCGTTGAGCCTTCTTTTGCAGAGAGATCGGTGATCAATCATAGAGATTACCTTATCCATGGCAATATCATTACGTCCAATGCCGTCAATGTTACAGAGACTGAAGTGATCACCGCAGATGGCCATAACATTGCGTTTGACTATCTTGTCATTGCCACTGGCCATGCAGATGACGTCCCCAAAAATAGGATGGAAAGACTTGATCAGTTCATAGAAGACAATGAAAGGATAAAATCTGCTCGTTCTATTTTGATTGTTGGGGGAGGTCCTACTGGCGTGGAACTTGCTGCAGAGATAGCTATTGATTTTCCAGACAAGAAGGTTACATTAGTGCACAAAGGACCTAGGCTACTGGATTTCGTAGGAACAAAAGCTGCGGATAAGACTCTAAAATGGTTGGAGTCAAAGCATGTAGTGGTGAAACTAGAGCAATCAATTGACTTGAGCGAATTAACATATGAACACAAGACATATCGAACTTCAAATGGAGAGACCATTGAGGCAGATTGTTATTTCTTATGTTTAGGGAAACCACTTGCATCAGCATGGCTTGAGGAAACCATGTTGAAGTATGACTTGGATGATGAAGGAAGGGTTAAGGTAGATGAAAAGTTGAGAGTCACTGGTAGGAGAAACATTTTTGCAATTGGAGACATTACAGATATTCCAGAAATCAAACAAGGGTTTGCAGCACAGCAGCATGCTGAAGTGGTTGTGAAGAACTTGAAGGTGATGATAGATGGAGGAAGAGAATGTAGTCAATGTAGGATGGAAAATTACAAGCCACAGATAGCAATGGCAATAGTTTCACTTGGGAGGAAAGAGGCTGTGGCACAATTACCATTATTGACAATCATTGGAAGAGTTCCTGGATTCATCAAGTCTGGAGATTTGTTTGTTGGTAGAACAAGGAGACAAATGGGACTCAAACCTGATAATGTACATGCTTGA 1101 0.4169 MENHGGKKRVVIIGGGVAGSLVAKSLQFTAHVTLVDPKEYFEITWASLRSIVEPSFAERSVINHRDYLIHGNIITSNAVNVTETEVITADGHNIAFDYLVIATGHADDVPKNRMERLDQFIEDNERIKSARSILIVGGGPTGVELAAEIAIDFPDKKVTLVHKGPRLLDFVGTKAADKTLKWLESKHVVVKLEQSIDLSELTYEHKTYRTSNGETIEADCYFLCLGKPLASAWLEETMLKYDLDDEGRVKVDEKLRVTGRRNIFAIGDITDIPEIKQGFAAQQHAEVVVKNLKVMIDGGRECSQCRMENYKPQIAMAIVSLGRKEAVAQLPLLTIIGRVPGFIKSGDLFVGRTRRQMGLKPDNVHA* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00279 366 Gene3D - 6 350 - -
Lapu11g00279 366 PANTHER APOPTOSIS-INDUCING FACTOR 1 6 359 - -
Lapu11g00279 366 FunFam apoptosis-inducing factor 2 6 357 - -
Lapu11g00279 366 Pfam Pyridine nucleotide-disulphide oxidoreductase 8 284 IPR023753 GO:0016491
Lapu11g00279 366 PRINTS FAD-dependent pyridine nucleotide reductase signature 10 29 - -
Lapu11g00279 366 PRINTS FAD-dependent pyridine nucleotide reductase signature 248 270 - -
Lapu11g00279 366 PRINTS FAD-dependent pyridine nucleotide reductase signature 132 150 - -
Lapu11g00279 366 SUPERFAMILY FAD/NAD(P)-binding domain 6 272 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00279 Lapu-Chr11 5867264 5869644 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00279 10 276 EF-hand Containing Proteins AT4G28220 23.529 1.10e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00279 K22745 - gmx:100785294 620.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00279 11 5867264 5869644 Lapu11g00279 11 5867264 5869644 ECH