Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00278 ATGGAAAAAGATGGGAAGAGAGTGGTGATCCTAGGAGGTGGTGTTGCGGGATCCGTGGTCGCTAAATCTCTTCAATTCCATGCCCATGTCACCCTCATTGATCCGAAGGAATATTTTGAGATTCCATGGGCAAATTTGAGGTCAATGGTTGAGCCATCTTTTGCTGAGAGGACGTTGATCAATCACAGAGATTACCTTGTCAATGGCGATATCGTTACGTCCAATGCCATCAATATTACAGAAACTGAAGTGTTGACTGCAGATGGCCGTCGAATTGGCTATGACTATCTTGTTATTGCCACTGGCCATGCAGATCCTGTCCCCAAAAGTAGGAGTGAAAGACTTGATCAGTTCAAAGAAGAGAATCAAAAGATAAAATCTGCTCATTCCATTCTGATTATTGGAGGAGGTCCCACTGGTGTGGAACTTGCCGGGGAGATAGCTGTTGATTTTCCAGATAAGAAGGTTATACTAGTACACAAAGGATCGAGGCTGCTCGAGTTTATAGGGGCAAAAGCTGGGCAGAAGACTCTTAAATGGCTGAAATCAAAGGATGTTGTTGTGAAACTAGACCAAAGAGTTAACTTGAATGGATTCATAGATGGACAGAAGATATATCGAACTTCAATTGGAGAGACCATTGAGGCAGACTGTCATTTTTTATGCATAGGGAAACCACTTTCTACAGCATGGCTTGAGGAAACCGTGTTGAAGAATGACTTGGATGCTCAGGGAAGGATCAAGGTAGACGAAAAATTGAGAGTCAATGGTCGGGGCAACATCTTTGCAATAGGAGATATTACAAATATACCAGAAATCAAGCAAGGGTTTTTGGCACAGCAGCAGGCTGATGTTGTTGTGAACAACCTGAAGGTGATAATACAGGGAGCAAGAGAATGTAGGATGGAAACTTACAGGCCACATTCACCAATTGCAATAGTTTCACTTGGGAGGAAAGAAGCAGTGGCACAGTTACCATTCTTGACAATCATTGGAAGAATTCCAGGATTCATTAAGTCTGGAGATTTGTTTGTTGGTAAAACAAGAAAACAAATGGGACTCAGTCATGATATTGTACAAGCTTGA 1086 0.4227 MEKDGKRVVILGGGVAGSVVAKSLQFHAHVTLIDPKEYFEIPWANLRSMVEPSFAERTLINHRDYLVNGDIVTSNAINITETEVLTADGRRIGYDYLVIATGHADPVPKSRSERLDQFKEENQKIKSAHSILIIGGGPTGVELAGEIAVDFPDKKVILVHKGSRLLEFIGAKAGQKTLKWLKSKDVVVKLDQRVNLNGFIDGQKIYRTSIGETIEADCHFLCIGKPLSTAWLEETVLKNDLDAQGRIKVDEKLRVNGRGNIFAIGDITNIPEIKQGFLAQQQADVVVNNLKVIIQGARECRMETYRPHSPIAIVSLGRKEAVAQLPFLTIIGRIPGFIKSGDLFVGKTRKQMGLSHDIVQA* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00278 361 PRINTS FAD-dependent pyridine nucleotide reductase signature 130 148 - -
Lapu11g00278 361 PRINTS FAD-dependent pyridine nucleotide reductase signature 246 268 - -
Lapu11g00278 361 PRINTS FAD-dependent pyridine nucleotide reductase signature 216 232 - -
Lapu11g00278 361 PRINTS FAD-dependent pyridine nucleotide reductase signature 8 27 - -
Lapu11g00278 361 SUPERFAMILY FAD/NAD(P)-binding domain 126 224 IPR036188 -
Lapu11g00278 361 PANTHER APOPTOSIS-INDUCING FACTOR 1 4 354 - -
Lapu11g00278 361 FunFam apoptosis-inducing factor 2 4 352 - -
Lapu11g00278 361 Gene3D - 4 347 - -
Lapu11g00278 361 SUPERFAMILY FAD/NAD(P)-binding domain 5 291 IPR036188 -
Lapu11g00278 361 Pfam Pyridine nucleotide-disulphide oxidoreductase 6 272 IPR023753 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00278 Lapu-Chr11 5855340 5860275 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00278 8 274 EF-hand Containing Proteins AT4G28220 23.167 3.02e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00278 K22745 - gmx:100813439 616.69