Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00268 ATGGGAAAGAAGAACGAGAACCAGAAAACGGGGCTAGGTCGAGCCCTGGTGAAGCAGCACAATCAGATGATCCAACAGAGCAAGGACAAGTCTCGCTTCTACAAAAAGAAGTTTCTCGAATCCTTCACCGAAGTCTCCGACATCGACGCCGTCATCGAACAATCCCTCGAACCTCTCCCCGAACACGCCGCCGCCTCCACCACCATCATCAGCCTGGACCCTGGCGAAATGACACCTGAAGAAACGAGGAAGCAGGAGGAGGCGCTCCACGCCAGCAGCCTCCGAGTTCCTCGCCGGCCGCCATGGACTCCCGACATGTCCCCCGAGGAGCTTCACGACAGCGAAACGCAAGCTTTCTTAGTTTGGCGTCGCAGTTTAGCGAGGCTTGAGGAGAATAAGAAGCTTGTCCTTACTCCGTTTGAGAAAAATCTTGACATCTGGAGACAGCTCTGGCGTGTTGTTGAGCGTAGTGATCTGCTTGTTATGGTTGTTGATTCACGAGATCCTCTGTTTTATCGCTGTCCAGACCTTGAGGCCTATGCACGCGAGGTTGATGAACATAAACGCACATTGCTTCTGGTTAATAAGGCGGATCTTTTGCCTGCTTCTATCAGAGAGAAATGGGCAGAATATTTTCGAGCTCATGATATTCTCTTCATCTTCTGGTCCGCTAAAGCTGCTACAGCAGCCTTGGAAGGCAAAAAGCTTGGTTCATCATGGGATGATGATAACATGGGGAGAACTAACAGTCCAGACACAGACACAAAGATATATGGAAGGGATGAGCTATTGGCCCGCCTGCAATCAGAAGCAGAAGAGATAGTGAACAGAAGGAGGAATTCTGGCCCCTCTGATGCAGGGCCATCTAACATTAAATCTCCTGCTGAAAATACTGCTGGTGGTTCATCATCGAGTAATGTAGTTGTGGGATTTGTTGGATACCCTAATGTGGGGAAAAGTTCAACTATTAATGCTCTGGTTGGACAGAAACGGACTGGTGTAACTTCCACTCCTGGGAAAACAAAGCACTTTCAGACATTAATTATCTCTGAGAAGCTGACCCTCTGTGATTGTCCTGGATTAGTTTTTCCATCTTTCTCTAGCTCAAGATATGAGATGATTGCTTGTGGGGTGTTGCCCATTGATAGGATGACTGAACACAGGGAATCTGTCCAAGTTGTAGCTGATAGAGTCCAAAGACATGTCTTCGAGCAGATTTACAAGATAAGGCTTCCTAAACCTAAGCCATATGAGTCCCAATCCCGTCCCCCTCTAGCATCTGAACTTTTAAGGGCATACTGTGCTTCCCGTGGGTATGTTGCTTCTAGTGGACTCCCTGACGAAACTAGGGCTACCCGTCAGATATTGAAAGATTACATTGATGGGAAGCTGCCTCACTATGAAATGCCGCCAGGTACATCAGACAAGGAATCTTTGGAAGATCCCACCAGACATGACTCAGTTGACTTGAATGCATCAGATTCGTCTGAAATTGAAAATTCTTCAGATGTTGAGAATGAACTTGCACCAAATCTTGAGCACGTATTGGATGACCTCAGTTCATTTGACATAGCTAATGGACTTGCTCAAAAAAGTACAACTCTTAAGAAGCCCAAGGCATCTCATAAACACCATAAAAAGCCACAGAGGAAAAAAGATCGTGCCTGGAGAGCAGGAAACGATGATGCTGATGGGACGCCAATTGCAAGATTCTTTCAGAAACCAGCTAATACAGGTTCTCTGAAGGATTGA 1752 0.4686 MGKKNENQKTGLGRALVKQHNQMIQQSKDKSRFYKKKFLESFTEVSDIDAVIEQSLEPLPEHAAASTTIISLDPGEMTPEETRKQEEALHASSLRVPRRPPWTPDMSPEELHDSETQAFLVWRRSLARLEENKKLVLTPFEKNLDIWRQLWRVVERSDLLVMVVDSRDPLFYRCPDLEAYAREVDEHKRTLLLVNKADLLPASIREKWAEYFRAHDILFIFWSAKAATAALEGKKLGSSWDDDNMGRTNSPDTDTKIYGRDELLARLQSEAEEIVNRRRNSGPSDAGPSNIKSPAENTAGGSSSSNVVVGFVGYPNVGKSSTINALVGQKRTGVTSTPGKTKHFQTLIISEKLTLCDCPGLVFPSFSSSRYEMIACGVLPIDRMTEHRESVQVVADRVQRHVFEQIYKIRLPKPKPYESQSRPPLASELLRAYCASRGYVASSGLPDETRATRQILKDYIDGKLPHYEMPPGTSDKESLEDPTRHDSVDLNASDSSEIENSSDVENELAPNLEHVLDDLSSFDIANGLAQKSTTLKKPKASHKHHKKPQRKKDRAWRAGNDDADGTPIARFFQKPANTGSLKD* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00268 583 MobiDBLite consensus disorder prediction 77 93 - -
Lapu11g00268 583 MobiDBLite consensus disorder prediction 275 304 - -
Lapu11g00268 583 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 145 439 IPR027417 -
Lapu11g00268 583 MobiDBLite consensus disorder prediction 462 505 - -
Lapu11g00268 583 MobiDBLite consensus disorder prediction 72 110 - -
Lapu11g00268 583 Gene3D - 146 365 IPR027417 -
Lapu11g00268 583 MobiDBLite consensus disorder prediction 536 553 - -
Lapu11g00268 583 Gene3D - 368 470 IPR023179 -
Lapu11g00268 583 FunFam Large subunit GTPase 1 146 365 - -
Lapu11g00268 583 CDD HSR1_MMR1 146 364 - -
Lapu11g00268 583 MobiDBLite consensus disorder prediction 282 304 - -
Lapu11g00268 583 PANTHER LARGE SUBUNIT GTPASE 1 HOMOLOG-RELATED 1 557 IPR043358 GO:0003924
Lapu11g00268 583 PRINTS GTP1/OBG GTP-binding protein family signature 309 329 IPR006073 GO:0005525
Lapu11g00268 583 PRINTS GTP1/OBG GTP-binding protein family signature 355 370 IPR006073 GO:0005525
Lapu11g00268 583 MobiDBLite consensus disorder prediction 473 492 - -
Lapu11g00268 583 Pfam 50S ribosome-binding GTPase 309 365 IPR006073 GO:0005525
Lapu11g00268 583 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 147 364 IPR030378 GO:0005525
Lapu11g00268 583 MobiDBLite consensus disorder prediction 531 583 - -
Lapu11g00268 583 MobiDBLite consensus disorder prediction 1 28 - -
Lapu11g00268 583 MobiDBLite consensus disorder prediction 12 28 - -
Lapu11g00268 583 FunFam Large subunit GTPase 1 369 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00268 Lapu-Chr11 5626404 5631037 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00268 K14539 - gmx:100817523 1012.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00268 11 5626404 5631037 Lapu11g00268 11 5626404 5631037 ECH