Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00255 ATGTCGGAAACCCTAAGCCCCAACCCCGCGGGGGGTCAGAAGCAGAGGTTCCGCATACAGTCCCCCACCACATCCTTCTTCTTGGGCTCCAACAACGACCAGCTCGAGCGCGACCAGGCACGCGCCGCCCGAGCCGCCATCCGCCGCAAGAGCCTCGGCCTCAGCCAACCTTTTCATGCCAACTCCAATACCTGCCTCAACAAACAGCAGATCTTCGACTTGTTCCAAAACTGCATCAAACTCGCCAGCGAAAACAAAATTAATCAGAAAAACACGTGGGAGTTGAACCTGATTGATCACCTTACTGATATCATCAAGGCTGAACAAGAAGATGACGCGGAGACTAATTTTCAGAAAGCAAGCTGCACTCTTGAGGCTGGAGTCAAAATTTATTCATTAAGAGTGGATTCAGTGCATTCTGAGGCATATAAAGTTCTTGGTGGGATGAATAGAGCAGGCCAAGAAGCTGAGCAAGACACTAGCCTGGATGGTCTTAATATTGAAAGTGGAGAAGATGAAAGCAGGAAAGAAACAAGCAAAAAGTTGTCACCTTTGTCAACATTGGAATCATCTTTCGAGGCACTTAATGTAAAGAAGTTTGATGCTGCATTTGTCGTGGATCCTCTCTATCGCCAGACAACAGCAAAATTTGATGAAGGTGGAGCCAAGGGTCTTTTAATGAATAATCTTGGTGTATATGGTGGATGTAGGGTGCTCTTTGATTCACTAGAAGTGCCTGCGAAGTGTATGGAAAAACAAAATCAATCTGATATTTCAGATACTGTTGATCTTTCTTTTGTCAAAGATTGTATCGAGCAGATGGTGTTGGACATGCGTGTGAAGGATGAAATTTCTCCAACTCTGAGGACTATCGTAAACCTATTTGATGAAAGTAACAGAAGGCCCACTAATGATCAACTTCACGACAATAATTCAGCTGAAGATCTTGACGCCTCTTCTTTTAATAATGAAAGTGGTTTTGACAGAGAAGAATACGAGAACAGCACGGCCTGGAGTGACGATCACGACGACCAAACGGTTGTTGCCGATGTAGGCTATAATTATGATGCAGATCCAAGTTTTCCCAGTTACCCTCAGGACAATGATGAGCCATTTCCCTCCCCAGACGCTGATATGGATGACAGATTTGACAATGTTGACGGATATTTGTTTTTGAGTCTGGGTTTTAATTCAAAACAAAACGCATGGGCTGGCCCTGATCATTGGAAGTATCGAAAATCCAAAGCCTCAGAGGTTCATCCAACTTCCGAAGATGGGTCGACCCTAAAAAGTAGGCAGCCAAAGAGTAAGAGACAAGCTGAAGTTGAATTGAATTTCACAAATTCTCTTGAGAAAGAAATGCTAGATACATTTTCTTCTCCCAAGAATCCCAAATTGCTACTACTCCCCGAAAGCAGATTGCCTTGCAATACAAAACTTCCCGAGGACTGTCACTATCAGCCAGAGGATCTTGTCAAGTTATTTCTTCTGTCTAATGTGAAGTGTCTCGGGAGGAGGGCAAACGGATTCGCAGATGGATCTAGAGAACCAGGCAATGAATATGAATCATTCCCTTCGTGGGACAATGGAAGTGTTGGTGAGGATGACTCTGGTGACTACGGAGGTGATCTTCATAGTGACATGGAGGACTCCAACACTCTTATTACTCAGCCTCGCCAGGTCAATAAAATTGAAGTCCAATATGACAAGACTTCCAAACAAGTCGACGTTCATGCACTAAAAATTACTATTTGGGACCATGTTCAGGAATCTGTTAAACTTCCTTTACAGGGTCAAAAAGATACCTTATCTTTCAGGAATATATTGGCCAACTTTCCTAGCGAATGCAATGCTGCTGCAACCATTAGTGACATCTCTCCTCATTTGTGCTTCATATGTCTATTGCATTTGGCAAACGAGAAAGGATTGAGCATTCAAAACTGCTCCAACTTGGATGATCTTACGATATGCTTTCCACATGTTGCTGACTCTATAACGGGAACAGTTTAG 2010 0.4363 MSETLSPNPAGGQKQRFRIQSPTTSFFLGSNNDQLERDQARAARAAIRRKSLGLSQPFHANSNTCLNKQQIFDLFQNCIKLASENKINQKNTWELNLIDHLTDIIKAEQEDDAETNFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGMNRAGQEAEQDTSLDGLNIESGEDESRKETSKKLSPLSTLESSFEALNVKKFDAAFVVDPLYRQTTAKFDEGGAKGLLMNNLGVYGGCRVLFDSLEVPAKCMEKQNQSDISDTVDLSFVKDCIEQMVLDMRVKDEISPTLRTIVNLFDESNRRPTNDQLHDNNSAEDLDASSFNNESGFDREEYENSTAWSDDHDDQTVVADVGYNYDADPSFPSYPQDNDEPFPSPDADMDDRFDNVDGYLFLSLGFNSKQNAWAGPDHWKYRKSKASEVHPTSEDGSTLKSRQPKSKRQAEVELNFTNSLEKEMLDTFSSPKNPKLLLLPESRLPCNTKLPEDCHYQPEDLVKLFLLSNVKCLGRRANGFADGSREPGNEYESFPSWDNGSVGEDDSGDYGGDLHSDMEDSNTLITQPRQVNKIEVQYDKTSKQVDVHALKITIWDHVQESVKLPLQGQKDTLSFRNILANFPSECNAAATISDISPHLCFICLLHLANEKGLSIQNCSNLDDLTICFPHVADSITGTV* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00255 669 MobiDBLite consensus disorder prediction 168 182 - -
Lapu11g00255 669 MobiDBLite consensus disorder prediction 299 378 - -
Lapu11g00255 669 PANTHER CONDENSIN COMPLEX SUBUNIT 2 20 659 IPR022816 GO:0000796|GO:0007076
Lapu11g00255 669 MobiDBLite consensus disorder prediction 324 347 - -
Lapu11g00255 669 MobiDBLite consensus disorder prediction 414 440 - -
Lapu11g00255 669 PIRSF Condensin_H 534 658 IPR022816 GO:0000796|GO:0007076
Lapu11g00255 669 PIRSF Condensin_H 261 541 IPR022816 GO:0000796|GO:0007076
Lapu11g00255 669 PIRSF Condensin_H 1 270 IPR022816 GO:0000796|GO:0007076
Lapu11g00255 669 MobiDBLite consensus disorder prediction 510 537 - -
Lapu11g00255 669 Pfam Condensin complex subunit 2 546 656 IPR022816 GO:0000796|GO:0007076
Lapu11g00255 669 Pfam Condensin complex subunit 2 61 512 IPR022816 GO:0000796|GO:0007076
Lapu11g00255 669 MobiDBLite consensus disorder prediction 154 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00255 Lapu-Chr11 5497099 5502274 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00255 K06676 - gmx:100799781 1157.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00255 11 5497099 5502274 Lapu11g00255 11 5497099 5502274 ECH