Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00253 ATGGCTAACCAGAACTCTCTCCCCCTCTATGAGAAACACTGGTACAAGCACACTTATAAAAGGGTAATGGAGACCTTGCTTTTAATCCTTCTCTTGTTGCTGCTTGGTTACCGCGTTATCTCTGTCAACAACTACTCTTTCCCTTGGTTTGTTGCTTTTTTCTGCGAATCATGGTTCACCATCTCTTGGTTTTTCACCCTCTCCACTCAATGGAGTCCAGCAGTAATCAAAACCTACCCAGAACGTCTCTTGAAAAGTGTGAAGGATCTTCCACCAGTGGATTTGTTTGTGACAACAGCAGACTCTGTGCTTGAACCACCCATTATCACAGTGAATACTGTGTTGTCTTTGTTGGCACTTGATTACCCACCTCACAAGCTAGCTTGTTATGTTTCTGACGATGGTTGCTCCCCCCTTACCTTCTACGCTCTTCAAGAAGCCTCCAAATTTGCAAAGTTTTGGGTACCATTCTGTAAGAAGTATAATGTGACAGTTAGAGCTCCATTCAGATACTTCTCTGACAACCTTGAGATCTCCAAGTCCAACAACACACCAGAATTCATACAAGAATGGCTACAAATGAAGGATATGTACAATGACCTTAGCAGAAAAATAGAATTGGGAGCATTCCAAAAACCAAATCCAAGTCATGGAGACTTTGCTGTTTTCTCAAACACTGAGAGGACAAATCACCCATCCATAATCAAGGTTATATGGGAGAACAAAGAAGGCTTTGAAGATGTATTGCCACATTTGATCTACATATCTAGAGAGAAGAGGCCAAAACATTCTCATCATTTCAAAGCTGGTGCCATGAATGTATTGACAAGGGTCTCCGGGTTGATGACCAATGCTCCCTTTATGCTGAACGTGGACTGTGACATGATTGTAAATAATCCGAAGATTGTTCATCATGCCTTGTGCGTTTTACTTGATCCCAAAGGAGAAAAAGAAGTTGCATTTGCTCAATTTCCCCAACAATTCTATGCAACATTGAAGGACGATCCTTTTGGAAACCAGATGGCAATTTTGATTAAGTACTTGGCAACTGGATTAGCTGGACTGCAGGGGCCTTTCTACGGTGGAACAAATTGCTTCCATAGAAGAAAAGTTATTTATGGTCTTTCTCCAGATAACATTGAAAATGGAAACAGCATATCAGAGAAGGAATTAAAACAAAAATTTGGAGGTTCAAAGGAGATTATGAAATCAGCTGCTAATGCTTTGGAAGGAAGAACATATTGGCCAAATGCTATTAATATTGCAAACGTTGTTGACGTAGCAAGCCAAGTTGCTGGTTGTGGATATGAATATGGCACTGGATGGGGCAAACAGGTAGGTTGGATATATGGATCACTAACAGAGGATGTGCTCACTGGAATCACAATACATGAAAAAGGTTGGAGATCAGAATTGTGTTCACCAATCCCCTTCGGCTTCACAGGCTTTGCTCCAGGAGGTGGCCCAACAACAATGGCCCAACAGAAGAGATGGGCCACTGGGATGCTGGAGATCTTCTTCAGCAAGCACTGTCCAATTTTTGGCACCCTTTTTCATAAGCTTACTTTGAGGCAGTGCATAGCATATATGTGGATTGTCAATTGGGGGCTCAGACCAGCGTTTGAAGTATGTTATGCATGTCTTCTTGCATACTGCATCATCACCAACTCCAATTTCTTGCCACAGGACCTTGGCATATGCATTCCCGTTGGTTTTCTTGTAATTTACAAGGTATACACTGTATCAGTATATTTAGCAGAAGGGTTATCAGTTAAAGCATGGTGGAATAATCAAAGGATGTCAAGAATAACACCCATGAATGCTGGTTTTTGTGCTTTTCTTAGTGTCCTACTGAAGATGTTAAGAATGTCTGAAACTGTATTTGACATAACAAAGAAAGATTTACCCCCAACAAATGATGTTGGAGATGATGAGGATGCTGGCAGGTACACATTTGATGAATCCCTAGTTTTCTTGCCAGGCACTACCATCTTATTGTTGCAATTGACAGCAATAATGATGAAGCTATTAGGGATGCAACCACCAGTGGCAAGTCAAAGCAAGAAGGAGTGTGGAATTGGTGAGATTTTTTGTGGTGTTTATTTGATAATTTGTTATTGGCCATTTCTAAGGGGATTGTTTGAGACAGGAAAATATAGGATCCCCTTGTCTACAGTATACAAATCAGCTATCTTAACATGTATCTTTCTACACCTATCTAGAATAACTGTTCTTAGTTGA 2241 0.4079 MANQNSLPLYEKHWYKHTYKRVMETLLLILLLLLLGYRVISVNNYSFPWFVAFFCESWFTISWFFTLSTQWSPAVIKTYPERLLKSVKDLPPVDLFVTTADSVLEPPIITVNTVLSLLALDYPPHKLACYVSDDGCSPLTFYALQEASKFAKFWVPFCKKYNVTVRAPFRYFSDNLEISKSNNTPEFIQEWLQMKDMYNDLSRKIELGAFQKPNPSHGDFAVFSNTERTNHPSIIKVIWENKEGFEDVLPHLIYISREKRPKHSHHFKAGAMNVLTRVSGLMTNAPFMLNVDCDMIVNNPKIVHHALCVLLDPKGEKEVAFAQFPQQFYATLKDDPFGNQMAILIKYLATGLAGLQGPFYGGTNCFHRRKVIYGLSPDNIENGNSISEKELKQKFGGSKEIMKSAANALEGRTYWPNAINIANVVDVASQVAGCGYEYGTGWGKQVGWIYGSLTEDVLTGITIHEKGWRSELCSPIPFGFTGFAPGGGPTTMAQQKRWATGMLEIFFSKHCPIFGTLFHKLTLRQCIAYMWIVNWGLRPAFEVCYACLLAYCIITNSNFLPQDLGICIPVGFLVIYKVYTVSVYLAEGLSVKAWWNNQRMSRITPMNAGFCAFLSVLLKMLRMSETVFDITKKDLPPTNDVGDDEDAGRYTFDESLVFLPGTTILLLQLTAIMMKLLGMQPPVASQSKKECGIGEIFCGVYLIICYWPFLRGLFETGKYRIPLSTVYKSAILTCIFLHLSRITVLS* 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00253 746 SUPERFAMILY Nucleotide-diphospho-sugar transferases 108 510 IPR029044 -
Lapu11g00253 746 Pfam Cellulose synthase 93 382 IPR005150 GO:0016020|GO:0016760|GO:0030244
Lapu11g00253 746 FunFam Cellulose synthase-like protein H1 222 381 - -
Lapu11g00253 746 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 221 380 IPR029044 -
Lapu11g00253 746 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 8 727 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00253 Lapu-Chr11 5482936 5492297 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00253 1 740 Glycosyltransferase AT2G32530 45.006 0.0 659
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00253 - - gmx:100500469 1253.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00253 11 5482936 5492297 Lapu11g00253 11 5482936 5492297 ECH