Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00252 ATGAATGTGTTGACAAGAGTGTCTGGGTTGATAACCAATGCTCCATTTATCTTGAACGTGGACTGTGACATGATTGTAAACAATCCAAAGGTTGTTCTTCATGCGTTGTGCATTTTGCTTGATTCCAAAGGAGAAAAAGAAGTTGCATTTGCTCAATTTCCCCAACAGTTCTATGCTACATTGAAGGACGATCCTTTTGGAAATCAGATGGCAATTTTTGTTAAGTACTTGACTGCTGGAATAGCTGGATTGCAAGGACCTTTCTATGGTGGAACAAACTGCTTAAATAGAAGAAAAGTTATTTATGGTCTTTTTCCATATACTAATTTTTCTGGAAACAGTTCATCAAAGGATGAATTAGAAGAAATTTTTGGAGATTCAAAGGAGTTCATGGAAACAGCTGCTCATGCTTTGGAGGGGAAGACATATTTACCTAATCATATTAATATTTTGATGGTTGTTGAGTTTGCAACCCAAGTTGCTAGTTGTGGATACGAACATGGCACTGGCTGGGGCAAACAGGTGGGGTGGATATATGGATCAATAACAGGGGATAAGCTCCTTGGACTGACAATACATGAAAAAGGTTGGAGATCAGAATTGTGCACACCAAACCCAATTGCCTTCACAGGTTTTGCTCCAGGAGGTTGCCCAATTGCAATGGCCCAACAAAAGAGATGGGCCATAGGATTGCTAGAGATCTTCTTTAGCAAACACTGTCCAATTTTTGGCTCCATTTTCCATAAGCTTACTTTGAGACAATGCTTAGCATATATGTGGATTATCAACTATTGGGGCCTAAAGCCAGTCTTTGAAGTATGCTATGCATGTCTCCTTTCACATTGCATCATCACCAACTCCAATTTCTTGCCCATGGTGAGCTTTTTGAGAAAAAATATATATTAA 906 0.3907 MNVLTRVSGLITNAPFILNVDCDMIVNNPKVVLHALCILLDSKGEKEVAFAQFPQQFYATLKDDPFGNQMAIFVKYLTAGIAGLQGPFYGGTNCLNRRKVIYGLFPYTNFSGNSSSKDELEEIFGDSKEFMETAAHALEGKTYLPNHINILMVVEFATQVASCGYEHGTGWGKQVGWIYGSITGDKLLGLTIHEKGWRSELCTPNPIAFTGFAPGGCPIAMAQQKRWAIGLLEIFFSKHCPIFGSIFHKLTLRQCLAYMWIINYWGLKPVFEVCYACLLSHCIITNSNFLPMVSFLRKNIY* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00252 301 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 2 111 IPR029044 -
Lapu11g00252 301 Pfam Cellulose synthase 116 293 IPR005150 GO:0016020|GO:0016760|GO:0030244
Lapu11g00252 301 Pfam Cellulose synthase 1 108 IPR005150 GO:0016020|GO:0016760|GO:0030244
Lapu11g00252 301 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 1 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00252 Lapu-Chr11 5476213 5478211 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00252 1 296 Glycosyltransferase AT2G32530 41.368 4.50e-72 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00252 - - pvu:PHAVU_011G101700g 539.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00252 11 5476213 5478211 Lapu11g00252 11 5476213 5478211 ECH