Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00222 ATGTTAATGCAAATTATACACGAACAGATAGTGGAAGAAGAAGCCAGGTTTGAAGCCGAAGTGGCAGAGGTGCAAGCATGGTGGAACTCTGAGAGGTTCAAGCTAACCAAAAGACCATACTCAGCTAGAGATGTGGTGTCCCTACGAGGCAACCTCAGACAAACCTATGGCTCAAATGAGATGGCCAAAAAGCTATGGCGCATTCTGAAGAATCACCAGGCCAATGGCACAGCCTCAAGGACTTTTGGTGCACTTGATCCTGTTCAGGTCACTCAGATGGCCAAGCACTTGGACACCATCTATGTCTCAGGGTGGCAGTGCTCAGCCACTCATACCACCACCAATGAGCCAGGCCCTGACCTAGCTGATTACCCTTATGACACTGTTCCCAACAAGGTTGAGCACCTCTTCTTTGCTCAGCAATACCATGACAGGAAGCAAAAAGAGGAGAGAATGAACATGAGCAGGGAAGAGAGGGCAAGGACCCCTTATGTTGATTATTTGAGACCAATTATAGCTGATGGTGACACAGGTTTTGGTGGCACCACAGCAACTGTGAAGCTTTGCAAGCTCTTTGTGGAGAGAGGTGCTGCTGGCATCCACATTGAGGACCAGTCTTCTGTGACCAAAAAGTGTGGCCACATGGCAGGGAAAGTGCTGGTTGCCATCAGTGAACACATCAATAGGCTTGTGGCTGCAAGGCTTCAGTTTGATGTCATGGGCGTGGAAACTATTTTGGTTGCTAGGACAGATGCAGAAGCTGCTAATTTGATTCAATCTAACATTGACACTAGGGACCACCAATTTATCTTGGGTGTGACCAACCCAAACCTTAGGGGGAAGAGCTTGGCAACTCTTATGGCAAAAGACATGGCTGCTGGGAAAAGTGGAGCTGAACTTCAGGCTTTGGAGGACGAGTGGCTGTCAAAGGCACAGTTGAAGACTCTCTCAGAAGCAGTTGTAGAAGCAATTAAGAGGCAGAACATTGGAGAGGAAGAGAAGAGAAGGAAGTTGAATGAGTGGATGCACCATTCAAGTTACGAAAGGTGTCTTTCCAATGAGGAAGGTAGGGAGATTGCTGAGAGGTTAGGAGTGAGGAACCTGTTCTGGGACTGGGACTTGCCTAGGACTAGAGAAGGATTTTACAGGTTCAAAGGGTCTGTAACAGCATCAGTTGTTAGAGGTTGGGCCTTTGCTCCACATGCTGATGTGATATGGATGGAAACTGCAAGCCCCAATGTGGCTGAGTGCACACAGTTTGCTGAGGGGGTTAGATCAAAGCACCCTGAGATGATGCTGGGGTACAACCTCTCTCCATCTTTCAACTGGGATGCTTCAGGCATGACCGATGATCAAATGAGAGACTTCATTCCAAAGATTGCAAAGTTGGGGTATGTGTGGCAGTTCATCACAGTTGGAGGCATGCATTCTAATGCACTCATCACTTCAACATTTGCTAGAGACTTTGCCAATAGGGGCATGCTGGCTTATGTGGAGAGGATTCAGAGAGAGGAGAGGAACAATGGGGTTGACACACTTGCTCACCAGAAATGGGCTGGTGCTAACTACTATGATAGATACCTCAAGACTGTCCAAGGAGGTGTGGCTTCAACTGCTGCAATGGGAAAAGGAGTGACTGAAGAGCAGTTTAAAGATTCATGGACTAGGCCAGGATCTGTTGACATTGATAGAGGCAGTATTGTGGTTGCTAAGGCCAGAATGTGA 1725 0.4765 MLMQIIHEQIVEEEARFEAEVAEVQAWWNSERFKLTKRPYSARDVVSLRGNLRQTYGSNEMAKKLWRILKNHQANGTASRTFGALDPVQVTQMAKHLDTIYVSGWQCSATHTTTNEPGPDLADYPYDTVPNKVEHLFFAQQYHDRKQKEERMNMSREERARTPYVDYLRPIIADGDTGFGGTTATVKLCKLFVERGAAGIHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETILVARTDAEAANLIQSNIDTRDHQFILGVTNPNLRGKSLATLMAKDMAAGKSGAELQALEDEWLSKAQLKTLSEAVVEAIKRQNIGEEEKRRKLNEWMHHSSYERCLSNEEGREIAERLGVRNLFWDWDLPRTREGFYRFKGSVTASVVRGWAFAPHADVIWMETASPNVAECTQFAEGVRSKHPEMMLGYNLSPSFNWDASGMTDDQMRDFIPKIAKLGYVWQFITVGGMHSNALITSTFARDFANRGMLAYVERIQREERNNGVDTLAHQKWAGANYYDRYLKTVQGGVASTAAMGKGVTEEQFKDSWTRPGSVDIDRGSIVVAKARM* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00222 574 FunFam Isocitrate lyase 261 376 - -
Lapu11g00222 574 Gene3D - 16 534 IPR040442 -
Lapu11g00222 574 CDD ICL_PEPM 65 256 IPR039556 GO:0003824
Lapu11g00222 574 ProSitePatterns Isocitrate lyase signature. 210 215 IPR018523 GO:0003824
Lapu11g00222 574 Pfam Isocitrate lyase family 20 550 IPR006254 GO:0004451|GO:0019752
Lapu11g00222 574 NCBIfam isocitrate lyase 21 550 IPR006254 GO:0004451|GO:0019752
Lapu11g00222 574 PANTHER ISOCITRATE LYASE/MALATE SYNTHASE 11 555 IPR006254 GO:0004451|GO:0019752
Lapu11g00222 574 PIRSF ICL 368 553 IPR006254 GO:0004451|GO:0019752
Lapu11g00222 574 PIRSF ICL 11 280 IPR006254 GO:0004451|GO:0019752
Lapu11g00222 574 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 10 534 IPR015813 GO:0003824
Lapu11g00222 574 Gene3D - 261 376 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00222 K01637 - gmx:100782793 1088.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00222 11 5056545 5059428 Lapu11g00222 11 5056545 5059428 ECH