Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00215 ATGCTCCCCGTCGTCAGTGCTGCAAGGACACTTCGTGGGCTTCCGAAGTTCCACGCTAACAGAACTAGATCCATTCTCGTCGACATGCAGCTTTTTCACAAACCCACCAAGGCTCAATCTCTGGTTAATTTCATCTTAGTCTCTTCTTCATTCTGCGCCCTTTATCTCATCGTGTCAGTGCTACTATTGGGGTCATCAAAGCAAGTACATGTGAACAGGACATCACAAGATGTGTCCACAGCCACCACCCTTGATCACCTTGTGTTTGGAATTGCTTCAAGCAAGAGTTCATGGGGCAAGAGGAAGGAGTACGTGAAGCTGTGGTGGAACAACAGCAACACCACCACCAAGAAAGCAATGAAGGGGTGTGTGTTCATGGACAGCCTCCCAGATGAAGAACATGTTAGCAATAAGAATGATACTTCTCTTCCTCCTCTTTGTGTCTCTCAAGACACTTCAAGGTTTCGTTTCACACACAAGGGCGGACCTCGCTCGGCAATACGCGTCGCACGTGTTGTTGCCGAGACCGTGGCAATGAACAATGATTCAGACGTGAGGTGGTTCGTTTTTGGAGATGATGACACGGTTTTCTTCCCGGAGAATGTGGTGAAGACTCTCTCCAAATATGATCACAAGCTTTGGTACTACATTGGTGCACACTCTGAGGTTTATGAGCAGAACCGGGTGTTTGGTTTTGGAATGGCTTTTGGTGGGGCAGGTTTTGCTATCAGCTCCTCTTTGGCAAAGGTCTTGGCCAAGGTTTTTGATTCATGTATAGAAAGGTACCCTCATCTCTATGGAAGCGATGGAAGGGTGTACTCTTGCTTGGCAGAACTTGGGGTAGGATTAACGCATGAATCCGGTTTTCACCAGGTAGATTTGAAGGGAAATACCTTTGGTTTATTGGCGGCACATCCCTTAACTCCTTTGCTGTCCCTGCATCATCCTGATTACACTGATCCAATCTTTCCAAACATGACTACTAAACAAGCTCTGAAGCATTTATTTAAAGCTGTAAATGTTGATTCCCAGAGGATGCTGCAACAAGCAGTTTGCTATGACAGATGGTTTTCATGGACAGTTTCAGTGTCATGGGGCTATGCTGTTCAGGTTTTCCCAAACCACATGCTTTTGCCAGATGTTCTAAAGGTGCAGGAGACATTCAGGCAGTGGAAGAAGGGGAGCATGTTGGCAAAAACATACACTTTCAACACAAGAGAACTTCACAACGACCCTTGTAAAAGATCCACCGTTTTCTTTCTAGACAGTGTATCATCTGACAAGGATGGCATCATTAGCAGTTACAAGAAATCTTTTCAGAATTGCTCAAACGATGCCGTGTCACCGAAGAAACTGGAAGTGATCAAAGTGGTCACAAAAAAGTTAGACCTTGGCATCAAACAGCTGCTTGCTCCAAGAAGGCACTGTTGTGATGTGTTGCCCTCTACTGGCCAGGACAAAATGGAAATTGCAATCAGGGAATGTGAAGATAAAGAGTTGGTTTACATGCACTGA 1515 0.4548 MLPVVSAARTLRGLPKFHANRTRSILVDMQLFHKPTKAQSLVNFILVSSSFCALYLIVSVLLLGSSKQVHVNRTSQDVSTATTLDHLVFGIASSKSSWGKRKEYVKLWWNNSNTTTKKAMKGCVFMDSLPDEEHVSNKNDTSLPPLCVSQDTSRFRFTHKGGPRSAIRVARVVAETVAMNNDSDVRWFVFGDDDTVFFPENVVKTLSKYDHKLWYYIGAHSEVYEQNRVFGFGMAFGGAGFAISSSLAKVLAKVFDSCIERYPHLYGSDGRVYSCLAELGVGLTHESGFHQVDLKGNTFGLLAAHPLTPLLSLHHPDYTDPIFPNMTTKQALKHLFKAVNVDSQRMLQQAVCYDRWFSWTVSVSWGYAVQVFPNHMLLPDVLKVQETFRQWKKGSMLAKTYTFNTRELHNDPCKRSTVFFLDSVSSDKDGIISSYKKSFQNCSNDAVSPKKLEVIKVVTKKLDLGIKQLLAPRRHCCDVLPSTGQDKMEIAIRECEDKELVYMH* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00215 504 FunFam Fringe-related protein-like 74 340 - -
Lapu11g00215 504 Gene3D - 74 346 - -
Lapu11g00215 504 PANTHER FRINGE-RELATED 46 499 - -
Lapu11g00215 504 Pfam Protein of unknown function, DUF604 226 477 IPR006740 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00215 Lapu-Chr11 4945805 4952550 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00215 41 470 Glycosyltransferase AT1G05280 54.091 3.67e-171 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00215 - - gmx:100813816 845.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00215 11 4945805 4952550 Lapu11g00215 11 4945805 4952550 ECH