LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu11g00213	ATGATTCTAGACAACCCCACATTGCAAAATTCCTCTTTGATTTCTCATGTCAGTTTTGGCAAACCTCTGAAACCAGTAGCTCCTAATCTTCACTCTACAATAATCTTCCCTCGATGCAATGCAACCACCACAAACGTTAACGTTTCTGAAAGAAAATCTGCCAACTACCAACCCAACCTCTGGAATTACGACTTTCTGCAGTCCTTGAAGCATGCCTACGCTGATGTAAGATACGAGGACAGGGCCAAGAAGCTGCAAGAGGAAGTTAGGAGAATGATAAAGGATGATAATTCAGATGTATTGCTCGAACTTGAACTCATTAACGATGTCAAACGCTTGGGCCTTAGTTACCATTATGAGCAGGAGATAGCAGAGGCCCTTCTTAGCTATCACTCTTCTGCAAGATTTAGTGGCACCATCGTTCACGGAAGCTTGCATGAAACTGCTCTGAGCTTCAGGCTTCTCAGAGAACATGGCTATCATGTCACACCAGATATATTTGAGAGGTTTAAAGATGAGAATGGTAATTTTAAGGCAAGCCTTATGAGTGATGTGAAGGGAATGTTGAGTCTGTACGAGGCATCGTTTCTTGGATATGAAGGAGAAGAGATTTTGGATGAGGCCAAGGCCTTCACTAGCTTCCATCTTAGGGGTGCCCTCAATGAATTTAGAGGTAGTAACATGCTCTTGGAACAAGTGAATCATGCATTGGAGCTTCCACTCCATCACAGAATCCAAAGGCTTGAAGCCAGGTGGTATATTGAATCTTATGCTAAAAGAAGAGACTCAAACCAAGTGCTGCTTGAAGCAGCAAAACTGGATTTCAATATTCTGCAGTCAACACTGCAAAATGATCTCCAAGAAATGTCAAGGTGGTGGAAGGGAATGGGACTAGCCTCAAAGTTAAGCTTCAGCCGAGACAGACTAATGGAATGCTTCTTTTGGACAGTTGGAATGGTCTTCCAGCCCCAGTTCAGTGATCTCCGCAAAGGTTTAACAAAAGTCACTTCCTTGATAACTACAATCGATGACGTTTATGATGTGTATGGCACCTTAGATGAATTAGAACTTTTCACAGCAGCTGTAGAAAGTTGGGATGTTAAAGCAGTTCAAGTTCTCCCTGACTACATGAAGATATGTTTTCTGGCACTGTACAACACTGTCAACGAATTTGCCTATGATGCCCTTAAAGAACAAGGACAAGACATTCTACCCTACCTCACCAAAGCTTGGTCTGATATGTTGAAAGCATTCTTACAAGAAGCCAAATGGAGTCGCGACAAACACTTGCCAAGATTCGACGATTATCTCAATAATGCATGGGTCTCAGTCTCTGGGGTAGTTATACTCACCCATGCTTATTTCTTGTTAAACCACAGCATCACAAAAGAGGCACTTGAATCCTTGGACAGTTACCACTCCCTGTTAGAGAAACCATCCATTATTTTTCGACTTTGCAATGATTTGGGTACATCAAAGGCAGAGTTAGAGAGAGGTGAAGCAGCAAGCTCCATTCCATGTTACATGCGAGAAAGTGGTGCTAATGAAGAGGTTGCTTACAAGCACATCCATAGTTTGCTTAATGAAACGTGGAAGAAGATGAACAAGGATCGAGTATCGCAGTCTCCTTTCCCAAAAGCTTTCGTAGAAACAGCTATGAACCTTGGAAGAATTTCTCACTGCACATACCAGTATGGAGATGCGCATGGAGCACCAGATATGACCGCCAAGAATCGCATACGATCCTTGATAATTGAACCCATTGCACTTTTTTAA	1776	0.4251	MILDNPTLQNSSLISHVSFGKPLKPVAPNLHSTIIFPRCNATTTNVNVSERKSANYQPNLWNYDFLQSLKHAYADVRYEDRAKKLQEEVRRMIKDDNSDVLLELELINDVKRLGLSYHYEQEIAEALLSYHSSARFSGTIVHGSLHETALSFRLLREHGYHVTPDIFERFKDENGNFKASLMSDVKGMLSLYEASFLGYEGEEILDEAKAFTSFHLRGALNEFRGSNMLLEQVNHALELPLHHRIQRLEARWYIESYAKRRDSNQVLLEAAKLDFNILQSTLQNDLQEMSRWWKGMGLASKLSFSRDRLMECFFWTVGMVFQPQFSDLRKGLTKVTSLITTIDDVYDVYGTLDELELFTAAVESWDVKAVQVLPDYMKICFLALYNTVNEFAYDALKEQGQDILPYLTKAWSDMLKAFLQEAKWSRDKHLPRFDDYLNNAWVSVSGVVILTHAYFLLNHSITKEALESLDSYHSLLEKPSIIFRLCNDLGTSKAELERGEAASSIPCYMRESGANEEVAYKHIHSLLNETWKKMNKDRVSQSPFPKAFVETAMNLGRISHCTYQYGDAHGAPDMTAKNRIRSLIIEPIALF*	592

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu11g00213	591	CDD	Terpene_cyclase_plant_C1	51	587	IPR044814	GO:0010333\|GO:0016102
	Lapu11g00213	591	PANTHER	OS04G0344100 PROTEIN-RELATED	50	569	-	-
	Lapu11g00213	591	SFLD	Terpene Cyclase Like 1 N-term	99	262	-	-
	Lapu11g00213	591	FunFam	Isoprene synthase, chloroplastic	98	263	-	-
	Lapu11g00213	591	Pfam	Terpene synthase family, metal binding domain	268	533	IPR005630	GO:0000287\|GO:0010333\|GO:0016829
	Lapu11g00213	591	SFLD	Isoprenoid Synthase Type I	263	589	-	-
	Lapu11g00213	591	SUPERFAMILY	Terpenoid cyclases/Protein prenyltransferases	57	261	IPR008930	-
	Lapu11g00213	591	FunFam	Isoprene synthase, chloroplastic	241	578	-	-
	Lapu11g00213	591	Pfam	Terpene synthase, N-terminal domain	61	237	IPR001906	GO:0010333\|GO:0016829
	Lapu11g00213	591	Coils	Coil	75	95	-	-
	Lapu11g00213	591	SUPERFAMILY	Terpenoid synthases	264	588	IPR008949	-
	Lapu11g00213	591	Gene3D	Farnesyl Diphosphate Synthase	58	578	IPR008949	-
	Lapu11g00213	591	SFLD	Terpene Cyclase Like 1 C Terminal Domain - Enzymatic	263	589	-	-
	Lapu11g00213	591	Gene3D	-	98	263	IPR036965	GO:0010333\|GO:0016829

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu11g00213	Lapu-Chr11	4883628	4888853	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu11g00213	K12742		K19968	gmx:100782452	952.199

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lapu11g00213	11	4883628	4888853	Lapu11g00213	11	4883628	4888853	ECH