Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00212 ATGGAAGCTTGCTGCTGCAACCTTGAAGTGGATGTAAATGGAGAAGAGACCTTCATGGTGGACAAGACTGTTATTACTCAGTATTCAAACAAGTTTGCTAGATTATTTGGAAAGTCTAGTGGTGCCACGGGAAAGCTTAAAGTAATATTCCATGATTTTCCAGGAGGTGCAGAAGGTTTTGAGCTTATGTTAAAATTCTGTTACAACAATGGAACAACTGATATAAGTCCTTCCAATTTGTTCCTTGCGCATTGTGCTGCTGAGTACATGGACATGAAGGAACCTGTGGCTGATGTATCTAACTTATTGGAGCAAACTGAAAAGTCACTCCAAGAGATCAACTATTGGACTTGGTCAGATGTTTTGATTGCTTTGAAGCAGTGCCAGAATTTACTAGTTCCAGATTGTTCGGTGATGGTAGAAAGATGCTTGGACACTATTGTGGGGAGGCTAGTTTTGGCTAGCGAAGCAAGTCCTTGTCCATCAACTAGTTCCACAGATAGTTCTTGGATTCGGTTTTCATGTGACTCTAAGAGCACCGAGAGTGTAAAAACAAGTTTCACTCGATTGACATGGTGGTTTGAAGATCTCCTTTTTTTGAGTCCCTTGTTGGTTGCAATGTTGGCTAAGTCAATGCTTTCGCGAAAGATGGACCATGTTTTGATCAGCAGGTTTCTTCTCTACTATCAGAAGGCTAAGTTTTCCACTTCTACAACAAATGAGAAGAGCAAGATAATAGAAATGGTCATAGATATGCATTATGATATGGATCTAAGTTGTGTTCCTTGCAAGACTTTTTTTGGGATTCTGAGGATTACGTTAGGTTTAAATATAAGCAAATGTAGCAGGAATAAGTTGGAGACTATGATTGGTTCCCAATTGGATCAAGCAACCTTGGACAATTTGCTTGTTCCATCTCCTTATGGAATAAGCTACTTGTATGATGTGAACCTTGTTTTGAGATTTTTGAAGGCATTCTTGCGGCGAGGAAATGGTGTAGTCACTCCCATTCGGATCAGGAAAGTTGCTAGCTTAATAGATTTGTATACAGCAGAAATAGCCCCTGATCCTTGTTTGAAAACTTCCAAGTTCTTGGCTCTTGTCACTGCACTTCCAGATTCTGCAAGAGATTCTTATGATGAGATCTACCATGCAATGGACATGTATCTTGAGGTACATGCTCAATTGTCACAGGAAGAAAGATTGAAGATATGCTGCGGTTTAAATTATGAGAAGCTTTCACCTCAAGCTTGTCTACACCTATCTCAGAACAAAATGTTTCCTTCAAAATCGGCAGTCCAGGCTCTTATCTCTCAACATTCTAAGCTAAAAAATTTACTCCATGTTACTCCCACTACAAGTTCATACAATGATTCACCTTGCAGCTCCAGTGGTGCAGCTCAAAAGGTAAAGAAAGATGAAACCAGTGAACAGGTTGTGTTGTATGCTGGCAATTTCGATCTTTCTACAGATAATGAGAAACTCAAAGCACATTTACAAGGAATGCAGTGGAGGGTCATGGAATTAGAGAAATTCTGTAGGAAAATGCAAGTCCAAATGGCAAAGATCACAAAATCAAAAGCATCAGGCAACAGTTATTCAAAATCTTTGCCAAAGCTATGCTCATGA 1629 0.3959 MEACCCNLEVDVNGEETFMVDKTVITQYSNKFARLFGKSSGATGKLKVIFHDFPGGAEGFELMLKFCYNNGTTDISPSNLFLAHCAAEYMDMKEPVADVSNLLEQTEKSLQEINYWTWSDVLIALKQCQNLLVPDCSVMVERCLDTIVGRLVLASEASPCPSTSSTDSSWIRFSCDSKSTESVKTSFTRLTWWFEDLLFLSPLLVAMLAKSMLSRKMDHVLISRFLLYYQKAKFSTSTTNEKSKIIEMVIDMHYDMDLSCVPCKTFFGILRITLGLNISKCSRNKLETMIGSQLDQATLDNLLVPSPYGISYLYDVNLVLRFLKAFLRRGNGVVTPIRIRKVASLIDLYTAEIAPDPCLKTSKFLALVTALPDSARDSYDEIYHAMDMYLEVHAQLSQEERLKICCGLNYEKLSPQACLHLSQNKMFPSKSAVQALISQHSKLKNLLHVTPTTSSYNDSPCSSSGAAQKVKKDETSEQVVLYAGNFDLSTDNEKLKAHLQGMQWRVMELEKFCRKMQVQMAKITKSKASGNSYSKSLPKLCS* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00212 542 SMART BTB_4 6 107 IPR000210 GO:0005515
Lapu11g00212 542 Pfam NPH3 family 191 418 IPR027356 -
Lapu11g00212 542 ProSiteProfiles NPH3 domain profile. 191 442 IPR027356 -
Lapu11g00212 542 ProSiteProfiles BTB domain profile. 6 70 IPR000210 GO:0005515
Lapu11g00212 542 SUPERFAMILY POZ domain 5 103 IPR011333 -
Lapu11g00212 542 PANTHER OS12G0117600 PROTEIN 7 519 IPR043454 -
Lapu11g00212 542 Gene3D Potassium Channel Kv1.1; Chain A 2 121 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00212 Lapu-Chr11 4848466 4852740 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00212 18 522 EF-hand Containing Proteins AT3G44820 26.984 2.17e-52 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00212 - - gmx:100784792 996.497