Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00196 ATGGAGAAGGGGTTAGTCTCCGTAGACCGTTGGGCAGAAGGAAGCGAAGCTTACTTCCTCACCCACCTTCACTCCGACCATACCCACGGCCTCACCTCCACGTGGTCCCACGCGCCCCTCTTCTGCTCCTCCCTCACGGCCAAACTCCTCCCCTTCAAGTTCCCCCGCTTCGATCTCTCCCTCCTTCGCATCCTCCATCCCGGCGCCTCCCACACCCTCACCCTCACATCCACCGTCATCCACGTCACTGCCATCGACGCCTGTCACTGCCCCGGTTCCATCATGCTCCTCTTCCGCGGCGACTTCGGCGCCGTCCTATACACCGGTGACTTCAGGTGGGAAACCACGTGCAACAGAGCAACCGACGCCCGCCACGTGCTTCGCCACGCTCTCCAGAATGTTCCTGTGGTTGACGTCGTTTACCTCGACAATACCTACTCCAATCCCGTCTATGATTTTCCACCTCGCCATGTTGCGGCTCAGAAGGTTATAGATATCATTTCTTCGCATCCCGATCATGACGTCATTATCGGGATTAACACTTTGGGGAAGGAAGATCTGCTGATTGAAATTTCGCGCGCGCTTCAAATCAAGATTTGGGTGTGGCCAGAGCGGTTGCGGACTATGCATCTTCTTGGTTACCATGATATTTTTACAACGAACACGTCTCTTACAAGAGTTAGAGCTGTTCCTCAATATAGCTTCAGCATTGAAACTTTAGAGGCACTGAATGCAATGCGCCCAACTATAGGAATCATGCCATCGGGTCTTCCATGGATAAAGAAATCCCTTCAAAAGAATGAGTTTCTTTCTGGTTCCTTTTTGGCTTCTCGTTATAAGAGAGGCAAATGGACTGCAAATAGTGAGGCCGATATTAATGACCAATTTGGAAACATAGTATCACCCTTGAAAATTCACGAGTACATGTATACAGTTCCCTACTCTGATCACTCCAATTATGAGGAGATTGAGGAGTTTATAAAGCTTGTTCAACCAACCAGACTCAAGGGCATTGTGGCTTCCTCGTCATGCTATATTGAACCTATGTACTATTTTGGTCGACTTTGTCGTGTTGACCAACAGACAAAACAGTTGCATGAGGAGCAAAAAAGGAAAGAAAGTTGTAAGAGAGAAAGAGAAGAAGCAGTCAGATCCAAAAATTCATTTGGAGGTGATAGTGTTCCGACAGGTAGAGACAGAAGCAAGGCCTTGAAGCGTAGGTTTTCTGGTGTTCGTCTGAGCAGGTTTAGTATATTGAGAAGAACGCACCGTGGTGCAAAAATTCAGGGAGATGACAGTTCTGATCAAGAATGA 1314 0.4848 MEKGLVSVDRWAEGSEAYFLTHLHSDHTHGLTSTWSHAPLFCSSLTAKLLPFKFPRFDLSLLRILHPGASHTLTLTSTVIHVTAIDACHCPGSIMLLFRGDFGAVLYTGDFRWETTCNRATDARHVLRHALQNVPVVDVVYLDNTYSNPVYDFPPRHVAAQKVIDIISSHPDHDVIIGINTLGKEDLLIEISRALQIKIWVWPERLRTMHLLGYHDIFTTNTSLTRVRAVPQYSFSIETLEALNAMRPTIGIMPSGLPWIKKSLQKNEFLSGSFLASRYKRGKWTANSEADINDQFGNIVSPLKIHEYMYTVPYSDHSNYEEIEEFIKLVQPTRLKGIVASSSCYIEPMYYFGRLCRVDQQTKQLHEEQKRKESCKREREEAVRSKNSFGGDSVPTGRDRSKALKRRFSGVRLSRFSILRRTHRGAKIQGDDSSDQE* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00196 437 Coils Coil 358 385 - -
Lapu11g00196 437 MobiDBLite consensus disorder prediction 367 386 - -
Lapu11g00196 437 Gene3D - 152 317 - -
Lapu11g00196 437 FunFam Interstrand crosslink repair protein 3 170 - -
Lapu11g00196 437 Pfam DNA repair metallo-beta-lactamase 216 334 IPR011084 -
Lapu11g00196 437 Gene3D - 6 337 IPR036866 -
Lapu11g00196 437 SUPERFAMILY Metallo-hydrolase/oxidoreductase 16 335 IPR036866 -
Lapu11g00196 437 PANTHER DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED 2 385 - -
Lapu11g00196 437 MobiDBLite consensus disorder prediction 367 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00196 Lapu-Chr11 4691270 4694114 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00196 K15341 - gmx:100775842 695.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00196 11 4691270 4694114 Lapu11g00196 11 4691270 4694114 ECH