Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00139 ATGACAATTTCATCTTCACTTACATCAACATCCACAGTCCCAAGAATCGCCGCAACAAGTCACACTTCCCACAATTCTCACCCCACCCATCTCAGATTCACCCCCAATTTCAAATCAACCTATTTACGCGCCTTCCTCCCCCTCACTTCACGCGTCCCTACGCGCCACCGCAGTGCGGCTGGCCCCGTCTGCCTCTTCACCGGCATCGTCGAGGAAATGGGTACCGTCAAGCAGCTCGGTACGGCCCCGCACGGTGGCTTTGACCTCAAAATCGCGGCTTCCACGGTCCTCGACGGCGTCAACCTCGGCGACAGCATCGCCGTAAACGGCACGTGCCTCACAGTGACGGAATTCGACGGCAAAGTCTCGGACTTTACGGTGGGGCTGTCGCCGGAGACGCTGCGCAAGACGTCGCTATCGGAGCTGGAGCCCGGGTCGCTGGTGAACCTGGAGCGCGCGTTGACGCCGGCAAGCCGCATGGGTGGGCACTTTGTGCAGGGTCATGTGGACGGCACGGGGGTGATTGTGTCGAAGGTTCCAGAAGGAGATTCCCTTTGGGTGAAGGTGAGGGCTGAAAAATCGTTGCTTAAGTACATTGTACCTAAGGGGTTTATTGCTGTGGATGGAACTAGTTTGACTGTGGTGGATGTGTTCGACGATGAAGGGTGTTTCAATTTCATGTTGGTGGCTTATACACAGCAGAAGGTAGTGATTCCTCTGAAGAACGTTGGGGACAAGTTGAATCTTGAGGTGGATATTCTTGGCAAGTATGTGGAGAGGCTTCTCGGTAGTGGTTTTGTTTCATCCTATACTAATAGTTCTTGA 825 0.5418 MTISSSLTSTSTVPRIAATSHTSHNSHPTHLRFTPNFKSTYLRAFLPLTSRVPTRHRSAAGPVCLFTGIVEEMGTVKQLGTAPHGGFDLKIAASTVLDGVNLGDSIAVNGTCLTVTEFDGKVSDFTVGLSPETLRKTSLSELEPGSLVNLERALTPASRMGGHFVQGHVDGTGVIVSKVPEGDSLWVKVRAEKSLLKYIVPKGFIAVDGTSLTVVDVFDDEGCFNFMLVAYTQQKVVIPLKNVGDKLNLEVDILGKYVERLLGSGFVSSYTNSS* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00139 274 Gene3D - 168 270 IPR023366 -
Lapu11g00139 274 CDD Riboflavin_synthase_like 66 254 IPR001783 -
Lapu11g00139 274 FunFam Riboflavin synthase, alpha subunit 65 155 - -
Lapu11g00139 274 NCBIfam riboflavin synthase 65 262 IPR001783 -
Lapu11g00139 274 ProSiteProfiles Riboflavin synthase alpha chain lumazine-binding repeat profile. 65 163 IPR026017 -
Lapu11g00139 274 FunFam Riboflavin synthase, alpha subunit 168 270 - -
Lapu11g00139 274 Gene3D - 65 155 IPR023366 -
Lapu11g00139 274 PANTHER RIBOFLAVIN SYNTHASE ALPHA CHAIN 63 272 IPR001783 -
Lapu11g00139 274 Pfam Lumazine binding domain 67 153 IPR026017 -
Lapu11g00139 274 Pfam Lumazine binding domain 166 252 IPR026017 -
Lapu11g00139 274 SUPERFAMILY Riboflavin synthase domain-like 65 154 IPR017938 -
Lapu11g00139 274 ProSiteProfiles Riboflavin synthase alpha chain lumazine-binding repeat profile. 164 262 IPR026017 -
Lapu11g00139 274 SUPERFAMILY Riboflavin synthase domain-like 159 263 IPR017938 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00139 K00793 - gmx:100809163 431.795