Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01527 ATGGCTTCTTCGGAAGCCGATTCCCGTCTGAGTCTGGTCGTGGTCCCCGCGCTAGAGAAGATAATCAAGAACGCGTCGTGGCGGAAGCACGCCAAACTCGCTCATGAGTGTAAATCCGTTATCGAGAGGCTCGGCCACCTGCACCAGCACTTTCCGACGCCGGGATCTCCCTCCGACAACGAACCGGAGACCGCTGTCCCTGGCCCGCTCCATGACGGCGGTCCGTTGGAGTTCTCCTTGGCGGAGTCAGAGTCGATCCTCGCGCCTCTCATCAATGCCGCCGGCTCCGGCGTCCTGAAGATCGCCGATCCCGCCGTCGACGCCATCCAGAAGCTCATTGCGCATGGCTACCTCCGCGGCGAGGCGGACCCGGACTCCGCCGCTGCCGCGCCGGAGGCCAAGCTCCTCTCCAAACTCATTGAATCGGTCTGCAAATGCCACGATTTCGGCGACGACGCGATGGAGTTGCTCCTCCTCAAGACCTTGCTCTCCGCCGTGACGTCAATTTCGCTCCGAATCCACGGTGATTCCTTGCTTCTCATTGTGCGGACCTGCTACGATATATATCTTGTGAGTAAGAATGTGGTGAATCAGACGACGGCAAAAGCGTCGCTGATCCAAATGTTGGTGATCGTGTTCCGCCGCATGGAGGCGGATTCCTCCACGGTGCCCATTCAACCGATTGTGGTGGCGGAATTGATGGAGCCCGAGGAGAAATCCGACGGAGACAATTCGATGACGCAGTTTGTGCAGGGCTTTATAACGAAGATAATGCAGGACATTGACGGCGTTTTGAACCCTACGACGCCGAGTGGGAAAGTTAATTTGTTAGGTGGGCACGACGGTGCGTTTGAGACCACCACGGTGGAGACTACGAACCCTACTGATTTGTTGGACTCTACTGATAAAGACATGTTGGATGCTAAGTATTGGGAGATTAGTATGTATAAGACGGCGTTAGAGGGACGGAAGGGGGAGCTTGTGGATGGGGAAGTGGTGGAGAGGGACGATGATTTGGAGGTTCAGATTGGCAACAAGTTGAGGAGAGACGCTTTTTTGGTGTTTAGGGCGCTTTGTAAGTTGTCCATGAAGACGCCTCCGAAGGAGGCGGTAGGGGACCCGCAGTTGATGAAGGGAAAGATCGTGGCTCTGGAGTTGCTGAAGATTTTGCTGGAGAATGCTGGGGCTGTGTTCAGGACTAGTGAAAGGTTTTTAGGTGCCATCAAGCAGTACTTATGTTTATCCTTGTTGAAGAACAGTGCTTCAACTCTTTTAATTGTGTTTCAGCTGTCATGCTCCATTTTCATCAGTCTGGTGTCAAGATTTAGAGCTGGATTGAAAGCTGAAATTGGAGTATTTTTTCCTATGATTGTTCTCAGGGTCCTAGAAAATGTTTCTCAACCTAATTTTCAGCAGAAGATGATAGTGCTTCGATTTCTGGAAAAGCTCTGTGTTGATTCACAGATATTGGTTGACATATTTATCAACTATGACTGTGATGTCAATTCATCAAACATATTTGAGAGGATGGTCAATGGACTCCTTAAAACTGCTCAAGGTGTCCCTCCTGGTGTAACAACCACGCTTTTGCCACCCCAGGAAGCAACACTAAAACTTGAAGCCATGAAAAGCTTAGTCGCAGTTCTAAAATCAATGGGGGACTGGATGAACAAACAATTGCGCATTCCTGACCCTCATTCAGCCAAGAAAGTTGAAGCGTTGGATAACATTCCTGAAACTGAAGGTTTTACCATGGTAAATGGGAATGGAGAAGACCCTCCTGATGGATCTGACACTCAATCAGAAGTCTCCAATGATGCTTCTGATGTTTCAAATATTGAGCAACGCCGGGCTTATAAACTGGAATTCCAGGAAGGTATATCTCTTTTTAATAGGAGACCTAAGAAAGGAATTGAGTTTCTCATCAATGCCAACAAGGTGGGTGATTCACCAGAGGATATAGCTGTTTTTCTTAAAGAAGCATCTGGGCTGAACAAGACTCTGATTGGTGATTATCTGGGAGAAAGAGAAGAGTTACCCTTGAAGGTAATGCATGCCTATGTGGATTCCTTTAACTTTCAAGGTATGGAGTTTGATGAGGCAATCAGGGTCTTTCTTCAAGGATTTAGACTGCCTGGTGAGGCACAGAAAATTGATAGGATCATGGAAAAGTTTGCTGAACGTTACTGCAAATGTAATTCAAAGGCCTTTTCTAGTGCCGACACAGCTTACGTCCTTGCCTATTCTGTTATAATGCTTAATACTGATGCTCACAATCCCGTGGTGAAGAATAAGATGTCTCCTGATGATTTCATAAGAAACAATCGTGGCATTGATGATGGAAAGGATCTCCCTGAGGAATACCTGAAGTCCTTGTTTGACAGAATATCTAGAAATGAGATCAAAATGAAAGAAAACGATGTGGCTCCTCAACAAAAACAGGCTGTGAACCCTAATCGACTTTTGGGCTTGGATAGTATATTGAATATTGTGATCCCTAAACGCGGTGAAGAAAATCTGGAGACCAGCGATGATCTTATCCGTCATATGCAAGAACAATTCAAAGAAAAAGCTCGCAAAACTGAATCAATTTATTATGCAGCAACAGATGTTGTAATCCTGAGATTCATGATTGAGGTGTGCTGGGCACCGATGTTAGCTGCCTTCAGTGTTCCTCTTGATCGAAGTGATGATGAGATTGTAATATCTCTATGTCTTGAAGGCTTCCGCTATGCTATTCACGTTACTTCAGTAATGTCGATGAAGACTCATAGAGATGCTTTCGTGACGTCATTAGCAAAGTTTACCTCACTACATTCACCAGCAGATATTAAGCAGAAAAATGTCGATGCAATTAAGGCAATAGTTGTTATTGCTGATGAGGATGGAAATTACTTACAAGAAGCTTGGGAACATATCTTGACTTGTGTTTCTCGGTTTGAGCATTTGCATCTTCTAGGAGAGGGGGCTCCACCAGATGCCACATTCTTTGCCTTTCCTCAGAATGATTCAGAAAAAACAAAGCAAACAAAGTCAACCATTCTTCCTGTTTTGAAGAAGAAGGGACCTGGGAGGATGCAGTATGCTGCTGCTTCATTGATGCGGGGTTCATATGATAGTGCTGGAATTGGTAGTAATGGTTCTGGAGTCACATCAGAACAGGTGAACCATCTAGTTTCTAATTTAAATATGTTGGAACAAGTTGGAAACTCTGAAATGAGTCGCATATTCACTCGGAGTCAAAAGTTGAACAGCGAGGCCATAATAGACTTTGTTAAGGCTCTGTGCAAGGTCTCCATGGAGGAGCTGAGGTCTCCATCTGATCCACGTGTTTTCAGCCTTACAAAGCTTGTTGAGATTGCGCACTACAATATGAACCGCATAAGGCTTGTGTGGTCAAGCATCTGGCATGTTCTCTCTGATTTCTTTGTAACTATTGGCTGTTCCGCAAACCTTTCAATTGCAATTTTTGCAATGGATTCCTTGCGTCAGTTGTCAATGAAATTTCTAGAGCGGGAAGAGCTGGCTAACTATAATTTTCAAAATGAATTTATGAAGCCTTTTGTCATTGTTATGCGAAAGAGTAGTGCTGTTGAAATTAGAGAATTAATTATCAGATGTGTCTCTCAGATGGTTCTTTCTCGTGTTAACAATGTCAAATCAGGATGGAAGAGCATGTTCATGGTATTCACAACAGCAGCTTACGATGACCACAAAAACATTGTACTCTTGGCTTTTGAAATTATTGAGAAGATTATTCGAGATTACTTTCCATACATCACTGAGACTGAAACCACAACCTTCGCAGACTGTGTAAATTGTCTAATTGCGTTTACCAATAGTAAATTCAATAAAGAGATTAGCCTAAATGCCATTGCTTTTCTACGGTTTTGTGCAACAAAACTTGCAGCAGGTGACCTTGGCTCATCATCATCAAGGAATAAGGATAAGGAAGTTCCCGGAAAGGCTTCCTCATCTTCACTTCAAACAGGAAATGAGGGGAAAAATGATAATGAAGAGGCTGCTGACAAAAATGATCATCTCTATTTCTGGTTTCCTTTATTGGCAGGTTTATCTGAGCTTAGCTTTGACCCAAGACCTGAGATTAGGAAGAGTGCCATGGAAGTCTTGTTTGAAACCTTACGTAACCATGGCCATCTCTTTTCGCTAACTTTATGGGAAAGAGTATTTGAGTCCATCTTATTTCCAATATTTGATTATGTTGGACATGCTATTGATCCTTCCGGAAGTAGTTCACCAGTCAATGAAGGAGAGGTGGATGATGGTGAGCTCGATCAAGATGCTTGGCTTTACGAGACGTGCACGTTGGCCCTCCAATTGGTTGTAGATCTTTTTGTTAACTTTTACAACACTGTCAATCCACTTTTAAGAAAGGTGCTGATGCTCCTGGTTAATTTTATAAATCGCCCTCATCAAAGCCTTGCAGGCATTGGTATTGCGGCTTTTGTTCGTTTGATGAGTAGTGCGGGGGAGCTATTTTCTGATGAAAAGTGGTTAGAAGTGGTTTTCTCGTTAAAAGATGCAGCAGAGGCAACACTTCCTAACTTTTTGTTTCTGGAAAGCGAGGACTTCACTAGAAGTCATGAGCATGCTTCAACCGCCGAGGCTGATAGAGATTTTGCTGAATCTGGCTTCCCAGATAATTTAGTAGACTTGAGAACTCGTCGTGTTTATGCTCATTTAACTGATGCAAAATGCCGAGCTGCTGTTCAGCTTTTATTGATTCAGGCGGTGACGGAGATCTATAACGTGTATCGTTCTCACCTTTCAGCAAAAGCCATGCTAGTCCTGTTTGATGCTTTGCACGGTATAGCGTTACACGCGCATCAGATTAACAACGATAGCATATTACGTTCAAAGCTCCAAGAGTTTGGTTCTATGAGCCAAATGCAAGACCCTCCACTCTTACGCCTTGAGAATGAATCGTACCAGATCTGCCTTACATTTTTACAAAACCTTGTCGTTGACAAGCCTCCTAGTTATGAGGCGGATGAGGTTGAATCTCATCTTATTCAGCTTTGTCAGGAAGTTTTGGAGTTTTATATTGAAGTTGCAGGTTTTGGACAAAATTCTGAATCTTCTCATGGTCGAGAGCCGCATTGGTTTATTCCCTTGGGCTCTGGGAAGAGTAGAGAATTGGCTGCTCGTTCACCTCTCATTGTGGCTACTCTGCACGCTATCAGTAGTTTGGGAGATATTTCCTTTGAGAAGAACCTGTCTCATTTCTTCCCTCTTATTTCTAGCTTGGTGCGTTGTGAACATGGATCCAAGGACGTCCAGGTTGCTCTCAGTGACATGCTTACTTTGTCAGTTGGTCCTGTTTTGCTACAGTCATGTTGA 5361 0.4428 MASSEADSRLSLVVVPALEKIIKNASWRKHAKLAHECKSVIERLGHLHQHFPTPGSPSDNEPETAVPGPLHDGGPLEFSLAESESILAPLINAAGSGVLKIADPAVDAIQKLIAHGYLRGEADPDSAAAAPEAKLLSKLIESVCKCHDFGDDAMELLLLKTLLSAVTSISLRIHGDSLLLIVRTCYDIYLVSKNVVNQTTAKASLIQMLVIVFRRMEADSSTVPIQPIVVAELMEPEEKSDGDNSMTQFVQGFITKIMQDIDGVLNPTTPSGKVNLLGGHDGAFETTTVETTNPTDLLDSTDKDMLDAKYWEISMYKTALEGRKGELVDGEVVERDDDLEVQIGNKLRRDAFLVFRALCKLSMKTPPKEAVGDPQLMKGKIVALELLKILLENAGAVFRTSERFLGAIKQYLCLSLLKNSASTLLIVFQLSCSIFISLVSRFRAGLKAEIGVFFPMIVLRVLENVSQPNFQQKMIVLRFLEKLCVDSQILVDIFINYDCDVNSSNIFERMVNGLLKTAQGVPPGVTTTLLPPQEATLKLEAMKSLVAVLKSMGDWMNKQLRIPDPHSAKKVEALDNIPETEGFTMVNGNGEDPPDGSDTQSEVSNDASDVSNIEQRRAYKLEFQEGISLFNRRPKKGIEFLINANKVGDSPEDIAVFLKEASGLNKTLIGDYLGEREELPLKVMHAYVDSFNFQGMEFDEAIRVFLQGFRLPGEAQKIDRIMEKFAERYCKCNSKAFSSADTAYVLAYSVIMLNTDAHNPVVKNKMSPDDFIRNNRGIDDGKDLPEEYLKSLFDRISRNEIKMKENDVAPQQKQAVNPNRLLGLDSILNIVIPKRGEENLETSDDLIRHMQEQFKEKARKTESIYYAATDVVILRFMIEVCWAPMLAAFSVPLDRSDDEIVISLCLEGFRYAIHVTSVMSMKTHRDAFVTSLAKFTSLHSPADIKQKNVDAIKAIVVIADEDGNYLQEAWEHILTCVSRFEHLHLLGEGAPPDATFFAFPQNDSEKTKQTKSTILPVLKKKGPGRMQYAAASLMRGSYDSAGIGSNGSGVTSEQVNHLVSNLNMLEQVGNSEMSRIFTRSQKLNSEAIIDFVKALCKVSMEELRSPSDPRVFSLTKLVEIAHYNMNRIRLVWSSIWHVLSDFFVTIGCSANLSIAIFAMDSLRQLSMKFLEREELANYNFQNEFMKPFVIVMRKSSAVEIRELIIRCVSQMVLSRVNNVKSGWKSMFMVFTTAAYDDHKNIVLLAFEIIEKIIRDYFPYITETETTTFADCVNCLIAFTNSKFNKEISLNAIAFLRFCATKLAAGDLGSSSSRNKDKEVPGKASSSSLQTGNEGKNDNEEAADKNDHLYFWFPLLAGLSELSFDPRPEIRKSAMEVLFETLRNHGHLFSLTLWERVFESILFPIFDYVGHAIDPSGSSSPVNEGEVDDGELDQDAWLYETCTLALQLVVDLFVNFYNTVNPLLRKVLMLLVNFINRPHQSLAGIGIAAFVRLMSSAGELFSDEKWLEVVFSLKDAAEATLPNFLFLESEDFTRSHEHASTAEADRDFAESGFPDNLVDLRTRRVYAHLTDAKCRAAVQLLLIQAVTEIYNVYRSHLSAKAMLVLFDALHGIALHAHQINNDSILRSKLQEFGSMSQMQDPPLLRLENESYQICLTFLQNLVVDKPPSYEADEVESHLIQLCQEVLEFYIEVAGFGQNSESSHGREPHWFIPLGSGKSRELAARSPLIVATLHAISSLGDISFEKNLSHFFPLISSLVRCEHGSKDVQVALSDMLTLSVGPVLLQSC* 1787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01527 1786 Pfam Sec7 domain 620 801 IPR000904 GO:0005085|GO:0032012
Lapu10g01527 1786 MobiDBLite consensus disorder prediction 581 610 - -
Lapu10g01527 1786 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 348 506 IPR032691 -
Lapu10g01527 1786 SUPERFAMILY Sec7 domain 616 807 IPR035999 GO:0005085|GO:0032012
Lapu10g01527 1786 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 78 1651 - -
Lapu10g01527 1786 MobiDBLite consensus disorder prediction 1307 1340 - -
Lapu10g01527 1786 MobiDBLite consensus disorder prediction 593 610 - -
Lapu10g01527 1786 Pfam Dimerisation and cyclophilin-binding domain of Mon2 6 219 IPR032629 -
Lapu10g01527 1786 Pfam Domain of unknown function (DUF1981) 1168 1250 IPR015403 -
Lapu10g01527 1786 SMART sec7_5 616 801 IPR000904 GO:0005085|GO:0032012
Lapu10g01527 1786 MobiDBLite consensus disorder prediction 48 73 - -
Lapu10g01527 1786 Gene3D - 604 693 - -
Lapu10g01527 1786 SUPERFAMILY ARM repeat 383 1516 IPR016024 -
Lapu10g01527 1786 FunFam Brefeldin A-inhibited guanine nucleotide-exchange protein 1 602 692 - -
Lapu10g01527 1786 CDD Sec7 619 801 IPR000904 GO:0005085|GO:0032012
Lapu10g01527 1786 Gene3D - 694 814 IPR023394 -
Lapu10g01527 1786 ProSiteProfiles SEC7 domain profile. 612 799 IPR000904 GO:0005085|GO:0032012
Lapu10g01527 1786 Pfam C-terminal region of Mon2 protein 1350 1410 IPR032817 -
Lapu10g01527 1786 MobiDBLite consensus disorder prediction 1321 1335 - -
Lapu10g01527 1786 Pfam BIG2 C-terminal domain 1577 1774 IPR046455 -
Lapu10g01527 1786 FunFam Brefeldin A-inhibited guanine nucleotide-exchange 1 694 812 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g01527 Lapu-Chr10 26356795 26368939 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g01527 K18442 - gmx:100778814 3223.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01650 1 29367243 29381842 Lapu10g01527 10 26356795 26368939 PCT