Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01493 ATGTCGTTTTCCGATTCCGAAACCTCCAACGGCGGAGCATCGGAGTACAAGCCGTTCCGCCAAGTCAGCCGCGACCGGTTATTATATGAAATGCTTAGATCGGCAAAGTCACCCGATTCGAAGGCATGGAAGGTGCTCATAATGGATAAAGTCACGGTGAAAGTTATGTCACATTCGTGTAAAATGGCAGATATTACAGACCAAGAAATTTCCTTGGTGGAAGACCTCTTTCGGAGAAGGCAACCGTTACCATCTCTGGATGCTATTTATTTCATGCAACCTTCTAAAGAGAATGTGGTCATGTTCCTGTCTGATATGTCTGGAAGGGAGCCCCTGTACAAGAAAGCCTATATATTTTTCAGTTCACCGATCCCAAAGGAACTTGTAAACCACATCAAGTGTGATACAAGTGTCTTACCCCGCATAGGAGCATTGAGAGAGATGAATTTGGAATATTTTCCAGTAGATGGCCAGGGGTTTACCACAGATCAAGAAACAGCAATGGACGATCTTTATGGCAACATTGAGAATACTCGCAGATTTAACACCTGCCTGAATAATATGGCAATTCGAATAGCTACAGTTTTTGCTTCGTTGAAGGAGTTACCGTGTGTGTGGTATCGTGCTTCAAAGGAAAGTGACGAGTCTACTGCAACAGCAGTTCGAGAATTAGTTCCTACCAAGCTTGCCGATGCTGTTTGGGACATGGTTTCTAAATATAAATCTACCATTCCCAGTTTTCCACAAAATGAAACTTGTGATCTGCTCATTGTTGACAGATCCGTAGATCAGATTGCTCCTGTCATTCATGAATGGACCTATGATGCTATGTGCCATGATTTGTTGGATATGGATGGAGATAAATATATGCATGAGGTTCCCAGCAAAACCGGGGGTCAACCTGAGATGAAGGAAGTCCTTCTACAAGATCATGATTCAGTCTGGCTTGAACTTCGTGACACTCATATTGCAGATGCTAGTGAAAGACTGCATGAAAAGTTTACCAATTTCGTATCAAAGAACAAAGCAGCACAAATTCAACAAAGTGGAAGAGATGGTAGTGAATTATCTACACGAGATTTGCAAAAGATGGTTCAAGCATTGCCGCAATACACTGAGCAAGTGGAAAAGATTTCACTCCATGTGGAGATAGCTGGAAAGATCAACAAAATTATTAGAGAAACAGAACTTAGACAGCTTGGACAGTTGGAACAAGATCTTGTTTTTGGGGATGCTGGAGCCAAGGAAGTCATTAACTTTTTAAGAACAAAGCAGAGTACAACTCCTGAATATAAGTTGCGTTTGTTGATGATTTATGCAATTGTCTATCCTGAAAAGTTTGAGGGTGACAAAGCTTCAAAGCTAATGCAGTTGGCAAAACTATCACCTGATGACATGAAAGTTATCGGTAATATGCAACTGCTGGCGGGATCATCAAACAAGAAATCGTCTACTGGTGGAGAAGGTGGTTTCTCACTCAAGTTCAGTAACCAGAAGACAAAGCATGCTGCACGCAAAGATCGGACTGATGATGAGGAAGAAACGTGGCAACTTTTTCGATTTTATCCCATGATAGAGGAGCTCATTAAAAATCTCAGTAAGGGTGCATTGCCCAAGAACGAATATTCGTGTAAAAATGAGCCAACACATAGTAGTGCTCGAGGGGATTCTGAAAAAAAAAGCAAAAACCCACAAATAGCTCCAACCACTGCTCCTCATTCAATTAGATCAAGGAGGACAGCAAACTGGGGAAGATCTCGTACTTCAGATGATGGATATTCAAGTGACTCCACGTTGAAGAATATGACTACTGATTTCAAGAAGATGGGAAAGCGAATCTTTGTGTTTATTATTGGGGGGGCTACTCGATCCGAGCTGCGAGTTTGTCACAAGTTGACAACAAAATTAAAAAGGGAAGTAATCCTAGGTACTACTTCCATGGATGATCCTCCGCAATATCTTACGAGAACAAAATTG 1977 0.4163 MSFSDSETSNGGASEYKPFRQVSRDRLLYEMLRSAKSPDSKAWKVLIMDKVTVKVMSHSCKMADITDQEISLVEDLFRRRQPLPSLDAIYFMQPSKENVVMFLSDMSGREPLYKKAYIFFSSPIPKELVNHIKCDTSVLPRIGALREMNLEYFPVDGQGFTTDQETAMDDLYGNIENTRRFNTCLNNMAIRIATVFASLKELPCVWYRASKESDESTATAVRELVPTKLADAVWDMVSKYKSTIPSFPQNETCDLLIVDRSVDQIAPVIHEWTYDAMCHDLLDMDGDKYMHEVPSKTGGQPEMKEVLLQDHDSVWLELRDTHIADASERLHEKFTNFVSKNKAAQIQQSGRDGSELSTRDLQKMVQALPQYTEQVEKISLHVEIAGKINKIIRETELRQLGQLEQDLVFGDAGAKEVINFLRTKQSTTPEYKLRLLMIYAIVYPEKFEGDKASKLMQLAKLSPDDMKVIGNMQLLAGSSNKKSSTGGEGGFSLKFSNQKTKHAARKDRTDDEEETWQLFRFYPMIEELIKNLSKGALPKNEYSCKNEPTHSSARGDSEKKSKNPQIAPTTAPHSIRSRRTANWGRSRTSDDGYSSDSTLKNMTTDFKKMGKRIFVFIIGGATRSELRVCHKLTTKLKREVILGTTSMDDPPQYLTRTKL 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01493 659 MobiDBLite consensus disorder prediction 539 599 - -
Lapu10g01493 659 MobiDBLite consensus disorder prediction 562 599 - -
Lapu10g01493 659 SUPERFAMILY Sec1/munc18-like (SM) proteins 19 655 IPR036045 -
Lapu10g01493 659 PANTHER VESICLE PROTEIN SORTING-ASSOCIATED 30 655 IPR001619 GO:0016192
Lapu10g01493 659 MobiDBLite consensus disorder prediction 479 498 - -
Lapu10g01493 659 Gene3D Syntaxin Binding Protein 1; Chain A, domain 2 276 392 IPR043127 -
Lapu10g01493 659 Gene3D - 12 147 IPR043154 -
Lapu10g01493 659 Gene3D - 523 659 IPR027482 -
Lapu10g01493 659 PIRSF VPS45_Sec1 14 659 IPR001619 GO:0016192
Lapu10g01493 659 Pfam Sec1 family 44 654 IPR001619 GO:0016192
Lapu10g01493 659 Gene3D - 152 275 IPR027482 -
Lapu10g01493 659 MobiDBLite consensus disorder prediction 479 509 - -
Lapu10g01493 659 Gene3D - 395 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g01493 Lapu-Chr10 25074584 25090366 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g01493 K15292 - gmx:100783301 1189.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g01493 10 25074584 25090366 Lapu10g01493 10 25074584 25090366 ECH