Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01487 ATGGCTAACTGGTCCCCTGAAAATGCCAAGAGAGCTTATCTTCAAGCACTCAAAATGGCAAAAAGAAACAAAGAACCTGATGTAGCTGAGTTCATATCTGCTCTTGCAGCAGGAAACAATGCACAACTCATGGTGGTGGCCGGCGCCGGAGTGGCCAGTTCTGCCACCCTTGCACTGGCTGCAGCTGCTCATCAAACTGGTGGCCGTGTGATATGTGTATGTTGTGACCAAATAGAGACACGTGCATTGAGAAAAGATCTAGGAGTTTATGGAGGTCGTGTTGAGTTTGTTGTAGGAGATGTGAGAAGCCTTCTGCTAGGAGATTATAAAGGAGCTGATTTTGTGCTTGTGGATTGTGACATCAGTAATGCAAGGGAAGCTTTTCTAGCAGCATTTAAAGGAGCCAGCAAAGATGGTGCAGTTGTGGTTGGATATAATGTTAAGCATAGAGCCTCAAGATGGAGACAACTAAGAGCATCATTTTTACCCATTGGAGAAGGGTTGTTGGTGGCAAAAATAGATCCAAATGTGAAGGGTAATCACGGGATTGTTCAAAGGAGGAGTCGTTGGATTGTTCAAGTGGACAGCTGCACTGGCGAGGAACATATTTTTAGGATCACCTCTCCTCACAAGAAAGTGCAGATTGAAGTTTAA 654 0.448 MANWSPENAKRAYLQALKMAKRNKEPDVAEFISALAAGNNAQLMVVAGAGVASSATLALAAAAHQTGGRVICVCCDQIETRALRKDLGVYGGRVEFVVGDVRSLLLGDYKGADFVLVDCDISNAREAFLAAFKGASKDGAVVVGYNVKHRASRWRQLRASFLPIGEGLLVAKIDPNVKGNHGIVQRRSRWIVQVDSCTGEEHIFRITSPHKKVQIEV* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01487 217 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 25 171 IPR029063 -
Lapu10g01487 217 Gene3D Vaccinia Virus protein VP39 5 177 IPR029063 -
Lapu10g01487 217 PANTHER DUF1442 FAMILY PROTEIN 1 205 IPR009902 -
Lapu10g01487 217 Pfam Protein of unknown function (DUF1442) 4 205 IPR009902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g01487 Lapu-Chr10 24986344 24987808 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g01487 - - pvu:PHAVU_010G083400g 386.341