Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01472 ATGGAAGTTGGTATGCTTCCAATCTCAGCTTCAAAGAGAGGAAAACTCTTGGCTGCTGGTTACACTACTCTCGATGCCATTGCTCGTGCCTCCGCATCCCACCTTGCTCTAGATATTGAAGTTTCTGATAGTGAAGCCTGCGAAATTCTGAATCTTGCAGCCAAAGCTGGTGCTTTGGAGAGACCAAACGGATCTCACTCTACTATTGTTGGTGGTGGTCAGACTGCCTGGGATATGCTGAATGATGAGAAGTTTTCTTCTTACATTACCACATCTTGTGTGGATCTGGATAACATCCTTGGCGGAGGAATTAAGTGTAAAGACGTCACTGAAATAGGTGGAGTTCCTGGCATTGGTAAAACACAAATTGGGATTCAACTTGCTGTAAATGTTCAGATTCCTCAAGAATATGGTGGCCTAGGTGGGAAGGCAATATACATTGACACAGAAGGAAGCTTTATGGTTGAACGAGTTCTTCAAATTGCTGAAGCATGCATAGAAGACATGGCAGAATATAGCAACCACTTTCACAAGGATTTTCAAGCTTGTGAAGTTAAAATGCACCCTAACAATATCTTGGAAAATATATTCTATTTTCGTGTTTGCAGCTACACTGAGCAAATTGCCTTGATAAATTACTTAGACAAATTCATCATGGAGAATAAAGACGTAAAGATCATCATTGTTGACAGTGTTACTTTCCACTTCCGCCAAGACTTCGATGATATGGCTCGGAGGACTCGATTACTCAGTGAAATGGCTTTGAAGTTGATGAAACTTGCAAAAAAATTCTGTTTGGCTGTTGTTATGCTGAATCAAGTAACAACCAAGTTCATTGAAGGTTCATTTCAATTGACCCTTGCACTAGGGGATAGCTGGTCACATTCATGCACAAATAGGATAATATTATTTTGGAATGGCAATGAAAGACATGCATTTATTGACAAGTCCCCTTCTCTTAAATCAGCATCTGCTCCTTATTCTGTGACTATTAGGGGCATAAGAAATTCTACTTCAAGCTGCAAACGGATCAAGATGATGTGA 1044 0.4033 MEVGMLPISASKRGKLLAAGYTTLDAIARASASHLALDIEVSDSEACEILNLAAKAGALERPNGSHSTIVGGGQTAWDMLNDEKFSSYITTSCVDLDNILGGGIKCKDVTEIGGVPGIGKTQIGIQLAVNVQIPQEYGGLGGKAIYIDTEGSFMVERVLQIAEACIEDMAEYSNHFHKDFQACEVKMHPNNILENIFYFRVCSYTEQIALINYLDKFIMENKDVKIIIVDSVTFHFRQDFDDMARRTRLLSEMALKLMKLAKKFCLAVVMLNQVTTKFIEGSFQLTLALGDSWSHSCTNRIILFWNGNERHAFIDKSPSLKSASAPYSVTIRGIRNSTSSCKRIKMM* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01472 347 Pfam Rad51 74 336 IPR013632 -
Lapu10g01472 347 Gene3D - 69 338 IPR027417 -
Lapu10g01472 347 ProSiteProfiles RecA family profile 1. 85 274 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Lapu10g01472 347 PANTHER DNA REPAIR PROTEIN RAD51 HOMOLOG 3 RAD51C 1 347 - -
Lapu10g01472 347 PIRSF Rad51 1 340 IPR016467 -
Lapu10g01472 347 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 88 334 IPR027417 -
Lapu10g01472 347 CDD Rad51C 109 318 - -
Lapu10g01472 347 FunFam DNA repair protein RAD51 72 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g01472 Lapu-Chr10 24614759 24627261 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g01472 K10870 - gmx:100527406 571.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g01472 10 24614759 24627261 Lapu10g01472 10 24614759 24627261 ECH