Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01412 ATGGCGAAGCGAGAAACCTCTGATTCCGAAGCCGAGGATGCTTCGATTTCAGGGTCAGAGTCCGAGGAGGCACAAACGGCGGACAATGGGAAGAAGGGCGAGACGGAGTATGAAAAACAGAGGCTGTCGAGAATTGCAGAGAACAGAGCCAGGTTGGAGGCTCTGGGCTTGCCCCAAATGGCTCTCTCCTTGAAAAGTTCGCATCTTCACACCGCTAAGAAGGGAAAAGAGAAGAAGGTTAAAGAAGACGATGATGAAGACTATGTACCCGAAGGCGAGGGAGGACCCGGTTCGAGTTCTTCAAGTGAGCATGATGAGGATCGTAAAGATCGAGACTTTGCAACTAAAAATTCTTCTGGGTCAAGGAAAAGGAAGGTGAAGAACAAAGGTTTGAAAAAGAAAGCTGGAAGGATGGATGTTAGTAATTCAGAGTACATTGATTACGATGATGATGAAGCTTTGAGGCAGGCAATTGCTCTTTCATTGCAAAACTCATCTGAAGGTTCATATTTAGCTGACCGGAATGTATTGAACATTAACAAGACTGAGAAAAAAGGAAACAATCAAATTCAAGAAGAAAAGGGCAGAAAGAAGAACAAAAAACCATTTGCAAGTCGGCTGCAACTCACGGAGGATGAGTTCATTGTACACTTCTTCCAGCTTGATGAAGCTGGAAAGGGAACTATAAATGTAAGGGATTTACAAAGGGCAGCTACAGCTCATGATTTTTTATGGACAGACAAAGAGTTGGTTGATATGATCCGCTGCTTCGATAGTGATGGGGATGGAAAGTTAAGCCTTGATGATTTTCGAAAGATTATTGTTCGTTGCAACATGATTAAAGAGTCTTGA 852 0.4331 MAKRETSDSEAEDASISGSESEEAQTADNGKKGETEYEKQRLSRIAENRARLEALGLPQMALSLKSSHLHTAKKGKEKKVKEDDDEDYVPEGEGGPGSSSSSEHDEDRKDRDFATKNSSGSRKRKVKNKGLKKKAGRMDVSNSEYIDYDDDEALRQAIALSLQNSSEGSYLADRNVLNINKTEKKGNNQIQEEKGRKKNKKPFASRLQLTEDEFIVHFFQLDEAGKGTINVRDLQRAATAHDFLWTDKELVDMIRCFDSDGDGKLSLDDFRKIIVRCNMIKES* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01412 283 SMART efh_1 213 241 IPR002048 GO:0005509
Lapu10g01412 283 SMART efh_1 249 277 IPR002048 GO:0005509
Lapu10g01412 283 SUPERFAMILY EF-hand 136 278 IPR011992 -
Lapu10g01412 283 MobiDBLite consensus disorder prediction 186 202 - -
Lapu10g01412 283 MobiDBLite consensus disorder prediction 65 138 - -
Lapu10g01412 283 Pfam EF-hand domain pair 217 274 IPR002048 GO:0005509
Lapu10g01412 283 ProSiteProfiles EF-hand calcium-binding domain profile. 245 280 IPR002048 GO:0005509
Lapu10g01412 283 MobiDBLite consensus disorder prediction 25 43 - -
Lapu10g01412 283 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 149 168 IPR003903 -
Lapu10g01412 283 ProSitePatterns EF-hand calcium-binding domain. 258 270 IPR018247 -
Lapu10g01412 283 MobiDBLite consensus disorder prediction 182 202 - -
Lapu10g01412 283 Gene3D - 120 279 - -
Lapu10g01412 283 MobiDBLite consensus disorder prediction 1 43 - -
Lapu10g01412 283 CDD EFh 221 274 IPR002048 GO:0005509
Lapu10g01412 283 MobiDBLite consensus disorder prediction 100 119 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g01412 35 283 EF-hand Containing Proteins AT1G73440 42.857 1.22e-50 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g01412 - - pvu:PHAVU_010G072500g 435.647