Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01411 ATGAGTTCCGCCGAGCTCCTTCACATACACCCCCAGGAGCTTCAGTTTCCCTTTGAATTGAGGAAGCAGATCTCATGCTCTTTGCAGTTGTCTAACAAGACAGACAACTATGTGGCTTTCAAGGTGAAGACAACAAATCCTAAGAAATACTGTGTTAGACCTAACACTGGAGTTGTGATGCCTAGGTCTACATGTGATATCATAGTAACAATGCAAGCACAAAAGGAGGCACCCCCAGACATGCAATGCAAGGATAAGTTTCTCCTTCAGAGTGTAGTTGCCAGTCCTGGTGCAACCACAAAAGATATCACTCCAGAAATGTTCAATAAGGAATCTGGTCATGATGTTGAAGAGTGCAAGTTGAGAGTTGTTTATGTTGCTCCTCCTCAACCACCATCTCCTGTTCGAGAAGGATCTGATGAAGATTCGTCACCTCGAGCATCTGTATCTGAAAATGGGCATTCAAATGCTTTGGAATTTACTGCAGCTTCAAAAGCTTTCAATGAGCGGGGTGAACATCAGGACACTTCTTTTGAGGCAAGAACTCATATTTCAAAGGTAACTCAGGAGAGGAATTCTGTCATTGAGCAAAACAAAAGACTTCAGCAAGAACTGGAGCTTTTGAGACGTGAAGCCAGCAGTAGCCGCGGCGGTGGCATACCGTTCATTTATGTAGTTCTTGTTGGCATCATTGGCATCTTTCTGGGTTTCCTACTGAAGAGGACGTGA 729 0.4417 MSSAELLHIHPQELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVMPRSTCDIIVTMQAQKEAPPDMQCKDKFLLQSVVASPGATTKDITPEMFNKESGHDVEECKLRVVYVAPPQPPSPVREGSDEDSSPRASVSENGHSNALEFTAASKAFNERGEHQDTSFEARTHISKVTQERNSVIEQNKRLQQELELLRREASSSRGGGIPFIYVVLVGIIGIFLGFLLKRT* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01411 242 Pfam MSP (Major sperm protein) domain 7 110 IPR000535 -
Lapu10g01411 242 MobiDBLite consensus disorder prediction 127 155 - -
Lapu10g01411 242 PIRSF VAMP_assoc_prot 1 241 IPR016763 GO:0005789
Lapu10g01411 242 ProSiteProfiles Major sperm protein (MSP) domain profile. 6 126 IPR000535 -
Lapu10g01411 242 Coils Coil 184 211 - -
Lapu10g01411 242 SUPERFAMILY PapD-like 2 140 IPR008962 -
Lapu10g01411 242 Gene3D Immunoglobulins 1 130 IPR013783 -
Lapu10g01411 242 FunFam Vesicle-associated protein 1-1 1 129 - -
Lapu10g01411 242 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 5 238 IPR016763 GO:0005789
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g01411 Lapu-Chr10 21925415 21929344 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g01411 - - gmx:100779655 426.402