Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01402 ATGTTGTCGCAGCAAGTGCTGCTGCATCTGCCGCCCCAGAAACTGTTCCTCTCGAGTTCCGCTTTAAATGTTAGAAAAATCCCATCTTTTACGAATTGTGAAAATGGGTATGGCTTTAGTTACAGCAGAGTAAATGCGCTAACTTTGGATGAACTTCCCCCAAACGCGCTTCGGAGGAAGAGGGAGCCGCAATGGAGAGGAGGCTTCAGCCTTGGGATCGACTTGGGGTTGGCTCGCACTGGCCTTGCCCTAAGCAAAGGCTTCTCTATTCGCCCCTTAACCGTGTTGGAACTGCGAGGACAGAAGCTTGAGTTCCATATTATTAACATTGCCGAACAAGAGGAGGTTGATGAGTTTATAATTGGGCTTCCAAAATCTGCTGATGGGAAGGAAACACCTCAGTCGAACAAAGTCCGAAGTGTTGCTGGAAGGCTGGCTGCTCAAGCTGCAGAGAGGGGTTGGAGAGTATATCTACAAGATGAACATGGGACAACTACAGAAGCCATGGATCGAATGGTCAACATGGGTTTAAGTAAGTCCAGTCAGCAAAAGAAACTCGATGCCTTTGCTGCCATGATGGTACTGGAGAGATATTTCTCCACTTCAGGTCAGGGTGCTGAGCTTGTTCTGCCCAAAAATCTAGAATTACAAGCAAAACTTCAAAGGGGTCCTCCCAAAGATGTTGATTTTTTCTCGGATGAAGAGTAA 708 0.4703 MLSQQVLLHLPPQKLFLSSSALNVRKIPSFTNCENGYGFSYSRVNALTLDELPPNALRRKREPQWRGGFSLGIDLGLARTGLALSKGFSIRPLTVLELRGQKLEFHIINIAEQEEVDEFIIGLPKSADGKETPQSNKVRSVAGRLAAQAAERGWRVYLQDEHGTTTEAMDRMVNMGLSKSSQQKKLDAFAAMMVLERYFSTSGQGAELVLPKNLELQAKLQRGPPKDVDFFSDEE* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01402 235 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN 52 219 IPR005227 GO:0006364
Lapu10g01402 235 Pfam Holliday junction resolvase 70 200 IPR005227 GO:0006364
Lapu10g01402 235 Gene3D - 70 207 IPR037027 GO:0006139
Lapu10g01402 235 NCBIfam Holliday junction resolvase RuvX 71 199 IPR005227 GO:0006364
Lapu10g01402 235 FunFam Holliday junction resolvase 70 207 - -
Lapu10g01402 235 CDD YqgF 71 199 IPR005227 GO:0006364
Lapu10g01402 235 SMART rnase_8s 68 168 IPR006641 GO:0006139
Lapu10g01402 235 SUPERFAMILY Ribonuclease H-like 69 201 IPR012337 -
Lapu10g01402 235 Hamap Putative pre-16S rRNA nuclease [yqgF]. 68 203 IPR005227 GO:0006364
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g01402 Lapu-Chr10 21703027 21706796 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g01402 - - gmx:100810356 373.629