Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01327 ATGCAAAACCAACAACAACAACGAGCCTCAGGTATCATCAACCCTAAGTATTGTGCTCCATATAATGTTGACCTGGCCATTCTGAGAAAGGTCTTGACATTAGCTGATAGCTTTTCCGTCACCGACGTTAATGGCAAAATGGTCTTCAACCTTAGTGCCTCTCCCTTGACCCTCCACGACCACCGTGTCTTGGTTGACGCCACCGGCGAACCCATCGTCACACTACGTCGGAAGATGACGACAACTCATGATCGGTGGCAAGTTTTTGGAGGTGAAAGCACGGAGATGAAGGATTTGATCTTTAGTGTAAAGAGATCGTCCTTTTTCCAGCTAAAGACAAAATTGGATGTGTTCTTAGCTAACAATACTAAAGAAGAAGTTTGTGACTTTAAGGTCAAAGGAAGCTGGTTCGAACGATCTTGTGTTGTTTATGCTGGTGAATCTCTCACCATTGTTGCCCAGATGCATAAGAAGCACACTGTTCAAAGCATTGCGATTGGGAAAGATAATTTCATGGTTACAGTGTATCCAAACATTGACTATGCATTCATAGTGGCACTGATTCTGATTCTGGACGAAATTAATCAAGACAAGAGACAATCTTAG 606 0.429 MQNQQQQRASGIINPKYCAPYNVDLAILRKVLTLADSFSVTDVNGKMVFNLSASPLTLHDHRVLVDATGEPIVTLRRKMTTTHDRWQVFGGESTEMKDLIFSVKRSSFFQLKTKLDVFLANNTKEEVCDFKVKGSWFERSCVVYAGESLTIVAQMHKKHTVQSIAIGKDNFMVTVYPNIDYAFIVALILILDEINQDKRQS* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01327 201 SUPERFAMILY Tubby C-terminal domain-like 12 195 IPR025659 -
Lapu10g01327 201 Pfam LURP-one-related 14 190 IPR007612 -
Lapu10g01327 201 Gene3D - 10 201 IPR038595 -
Lapu10g01327 201 PANTHER - 24 196 IPR007612 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g01327 Lapu-Chr10 18923976 18925183 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g01327 - - vra:106773941 353.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01750 1 30494351 30495160 Lapu10g01327 10 18923976 18925183 PCT