Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01298 ATGGAAGACCACAAAGAGAAGGTAACAGTTTCCGACCCCACACAAATGAAAATTGACGTGCAGCCAGAGCCGTTTGAGCCGAGTGTGGACGTCCACGCGCCCGGAACTAGTGGCGGCGCCACCGGTGTCCTACGGCAGTGGAAGAAGAAAGAAATGCTTGTGAGAGGCTCATTGGGGCTAAGAGGAATTGCTCTATTTTTCTCTTTGATTTCCTTCATGCTCATTGCCAGTAACAAGCATGGTGATTGGAAAGAATTTGACAAGTACCAGGAATACAGATACTTGCTGGCTGTGGCAATTCTATCGAGTTTGTACAGTGCAGTTCAAGTGTTTCGTCAAGTTCATGAACTTTCCACTGGGAAAAACATGATTCAGCCAAAAACAGCTGCATTGATTGATTTTGTTGGAGATCAGGTTGTAGCATATCTCTTGCTATCATCAACATCTTCAGCTATTCCAATAACAGATAGAATGAGGGAAACTGCAGACAATATATTTACGGACTCTTCAGCAGCAGCCATTGCTTTCACCTTTTTTGCTTTTTGGTGTTTAGCACTATCAGCTGTCATATCAGGATACAAACTATCCACCCAAACTTATATATAA 606 0.4323 MEDHKEKVTVSDPTQMKIDVQPEPFEPSVDVHAPGTSGGATGVLRQWKKKEMLVRGSLGLRGIALFFSLISFMLIASNKHGDWKEFDKYQEYRYLLAVAILSSLYSAVQVFRQVHELSTGKNMIQPKTAALIDFVGDQVVAYLLLSSTSSAIPITDRMRETADNIFTDSSAAAIAFTFFAFWCLALSAVISGYKLSTQTYI* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01298 201 Pfam Casparian strip membrane protein domain 56 182 IPR006702 -
Lapu10g01298 201 PANTHER CASP-LIKE PROTEIN 4A4 33 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g01298 Lapu-Chr10 17725005 17726685 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g01298 - - gmx:100527392 285.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01763 1 30639870 30642369 Lapu10g01298 10 17725005 17726685 PCT