Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01020 ATGTACGCTGATCGCGTGGAGAATGGAGGGCGGAGGTCCGTAAAGGAACGCCTAAATGGGAATGGTATCAGTGGCCCTACTCGGCAGCAGCAACAGCGTCAAATCACCGGCAAGAGGTCGAGGCAAGATGATAAGTGGGAACATGATCTCTTTGACGGTGATGAACCACATCGCAAGGTTAGTGCTCAAGATCTACGCCTCAAGCTTCAAAGGAAAGGTCTTCAACCTGCATCTCAGAGTGGAAAGAGTTATGCTCCAAAAATGCGGGATCTCCGTGAAAGGCTATCAGGGACAATGACAGTGCAGCCTACAAATGCTGATCCGCCAAAATCAAAAAATGTTAAACCAAGCAGTAAAAATGTTGGTGTTGAGGCCCCTGCAGCACAGATCAAAAGGCCAGCTGACCCAGCTCCTAAAAAGTCACGGAAGGCTGATTCTTCAATTGATGAATTTTTGCGGTCCTTGGGTCTTGAAAAGTACCTCATTACTTTTCAGGCTGAAGAAGTTGATATGACAGCTCTCAATCACATGACTGATGAAGATCTCAAGGCTATGGGCATACCAATGGGACCAAGAAAGAAGATACTTTTAGCATTGGAGTCGAAAGTGTAA 612 0.4641 MYADRVENGGRRSVKERLNGNGISGPTRQQQQRQITGKRSRQDDKWEHDLFDGDEPHRKVSAQDLRLKLQRKGLQPASQSGKSYAPKMRDLRERLSGTMTVQPTNADPPKSKNVKPSSKNVGVEAPAAQIKRPADPAPKKSRKADSSIDEFLRSLGLEKYLITFQAEEVDMTALNHMTDEDLKAMGIPMGPRKKILLALESKV* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01020 203 Gene3D - 145 203 IPR013761 -
Lapu10g01020 203 MobiDBLite consensus disorder prediction 97 118 - -
Lapu10g01020 203 ProSiteProfiles SAM domain profile. 143 203 IPR001660 GO:0005515
Lapu10g01020 203 Pfam SAM domain (Sterile alpha motif) 144 200 IPR001660 GO:0005515
Lapu10g01020 203 SUPERFAMILY SAM/Pointed domain 146 200 IPR013761 -
Lapu10g01020 203 CDD SAM_superfamily 150 200 - -
Lapu10g01020 203 MobiDBLite consensus disorder prediction 1 146 - -
Lapu10g01020 203 FunFam Sterile alpha motif domain-containing protein 145 203 - -
Lapu10g01020 203 MobiDBLite consensus disorder prediction 37 66 - -
Lapu10g01020 203 PANTHER SCP160 73 199 - -
Lapu10g01020 203 MobiDBLite consensus disorder prediction 20 36 - -
Lapu10g01020 203 SMART SAM_4 140 203 IPR001660 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g01020 Lapu-Chr10 12017658 12028559 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g01020 41 202 Glycosyltransferase AT3G07170 59.880 7.77e-58 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g01020 - - gmx:100784706 330.487