Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01009 ATGGGAACAAAGAGGGGCATTTCCAGAGTGAACCTTTTGTTTGAAAGGTTGAGAAAGCTGCCAATGAAAGTGAAGATCTTTTGTGGGGCATTGCTTGCTGTTTGTGCTTTGGTGGCCTTAAAGTTCACCTTCCCAAACCACTACTATTACTTCATGGTCTCTGAAACAGTTCATGTTGCTGGGATCATTGCTCTCATATACAAGCTTTTTGCCCTCAAGACATGTTCTGGTTTATCCCTCAAGACTCAAGAGCTCACAGCTTTATTTGTAGCTGCAAGATTAAGTTGTAGCACCTTGACAGAGGCTAACATACACACTGTGTTAGATCTGATATCTCTTTCTTCAACATTAGTGGTCATATGGATGATAAGATTCAAGTTAAAGTCATCCTATATCAAGGAGCTTGACAATGTGAAACTATACTTTGTGGTTGTCCCTTCTGCAATCGTTGCAATACTAATCCACCCTTATACACACCATTGGCGTTTTATTCGAATAGTTTGGGCATTCAGTTTGTATTTGGAAGCTGTTTCTGTTGTTCCTCAACTTCGTTTTATGCAGAATGCAAAGATGGTTGAAACATTTACAGGGTACTATGTATTCGCTCTCGGTGTTTCAAGATTCTTGTCTCTGGCTTACTGGATAATTCAGATATATGAGACTAGAGGGTCATATCTATTTTTGGCTGGGAGTGGCTATACCTGGTTTTTGGCAGCTTTTGTTGCAGAGATGGTTCAATCGTTCATCTTGGCTGACTTTTGTTACTATTACATGAAAAGCTTCGTGCAAGGGCAACTTTTGAGGAAAATGAAAGAACTTTATTGTCACATTACCACACCATCCATCCATTGCATACAAAATGGGAGCAAAGAGTAG 876 0.3984 MGTKRGISRVNLLFERLRKLPMKVKIFCGALLAVCALVALKFTFPNHYYYFMVSETVHVAGIIALIYKLFALKTCSGLSLKTQELTALFVAARLSCSTLTEANIHTVLDLISLSSTLVVIWMIRFKLKSSYIKELDNVKLYFVVVPSAIVAILIHPYTHHWRFIRIVWAFSLYLEAVSVVPQLRFMQNAKMVETFTGYYVFALGVSRFLSLAYWIIQIYETRGSYLFLAGSGYTWFLAAFVAEMVQSFILADFCYYYMKSFVQGQLLRKMKELYCHITTPSIHCIQNGSKE* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01009 291 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR 50 264 IPR000133 GO:0006621|GO:0016020|GO:0046923
Lapu10g01009 291 PRINTS ER lumen protein retaining receptor signature 50 69 IPR000133 GO:0006621|GO:0016020|GO:0046923
Lapu10g01009 291 PRINTS ER lumen protein retaining receptor signature 168 188 IPR000133 GO:0006621|GO:0016020|GO:0046923
Lapu10g01009 291 PRINTS ER lumen protein retaining receptor signature 190 204 IPR000133 GO:0006621|GO:0016020|GO:0046923
Lapu10g01009 291 PRINTS ER lumen protein retaining receptor signature 204 222 IPR000133 GO:0006621|GO:0016020|GO:0046923
Lapu10g01009 291 PRINTS ER lumen protein retaining receptor signature 77 97 IPR000133 GO:0006621|GO:0016020|GO:0046923
Lapu10g01009 291 Pfam ER lumen protein retaining receptor 74 217 IPR000133 GO:0006621|GO:0016020|GO:0046923
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g01009 Lapu-Chr10 11872281 11889202 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g01009 1 270 Miscellaneous Gene Families AT3G25160 58.889 7.20e-112 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g01009 K10949 - gmx:100790733 451.055